KEGG   Burkholderia pseudomallei 668: BURPS668_0088
Entry
BURPS668_0088     CDS       T00481                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
bpd  Burkholderia pseudomallei 668
Pathway
bpd03030  DNA replication
bpd03430  Mismatch repair
bpd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BURPS668_0088 (dnaN)
   03430 Mismatch repair
    BURPS668_0088 (dnaN)
   03440 Homologous recombination
    BURPS668_0088 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpd03032]
    BURPS668_0088 (dnaN)
   03400 DNA repair and recombination proteins [BR:bpd03400]
    BURPS668_0088 (dnaN)
Enzymes [BR:bpd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BURPS668_0088 (dnaN)
DNA replication proteins [BR:bpd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BURPS668_0088 (dnaN)
DNA repair and recombination proteins [BR:bpd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BURPS668_0088 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta_2 DNA_pol3_beta DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: ABN81732
Position
I:complement(84017..85120)
AA seq 367 aa
MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF
GVGGDQVATTVAARKLLDILRAMPDGQVTLSLADKRLTVQSGKSRFALQTLAADEFPTVA
QSKDFGASLAVPQKAFRQLLGMVYFAMAQQDIRYYLNGMLLVVDGDRLMAVATDGHRLAF
SSMKIEGSFGRQEVIVPRKTILELQRLLEDIDDTVKIDIAQTQAKFTFGQVELVSKLVEG
KFPDFQRVIPKAHKNTFEIGREELQRSLQRAAILTSDKFKGVRCIIAPGQLKIMSTNADQ
EEAQEELEIAYQGDTVDIGFNVTYLLDVLANLKVDTVQVSLGDASSSALITVPENDEFKY
VVMPMRI
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgcaactggtcaagaccgaacgagacaccctccttaggccgctgcaaaccgtgagcggt
atcgtcgaacgccgccacacgttgccgatcctcgccaatctgttgatcacgaagaacggc
ccggacgtgtcgttcctgtcgaccgacctcgagctccagatcacgacgcgcgccgatttc
ggcgtcggcggcgatcaggtcgcgacgaccgtcgcggcccgcaagctgctcgacatcctg
cgcgcgatgcccgacggccaggtcacgctgtcgctcgccgacaagcgcctgacggtccag
tccggcaagagccgcttcgcactgcaaacgctcgcggccgacgagttcccgaccgtcgcg
caatcgaaggatttcggcgcaagcctcgccgttccgcagaaggcgttccgccagttgctc
ggcatggtgtacttcgcgatggcgcagcaggacatccgctactacctgaacgggatgctg
ctcgtcgtggacggcgaccgcctgatggcggtggcgaccgacggccaccgcctcgcgttc
tcgtcgatgaagatcgaaggctcgttcggccgccaggaagtgatcgtgccgcgcaagacg
attctcgagctgcagcgcctgctcgaggacatcgacgacacggtcaagatcgacatcgcg
cagacccaggcgaagttcacgttcggccaggtcgagctggtgtcgaagctcgtcgagggc
aagttcccggacttccagcgcgtgattccgaaggcgcacaagaacacgttcgagatcggc
cgcgaagagttgcagcgctcgctgcagcgcgcggcgatcctcacgtccgacaagttcaag
ggcgtgcgctgcatcatcgcgcccggccagttgaagatcatgtcgacgaacgccgatcag
gaagaggcgcaggaagaactggaaatcgcctaccagggcgacaccgtcgacatcggcttc
aacgtcacgtatctgctcgacgtgctcgcgaacctgaaagtcgacaccgttcaggtgagc
ctcggcgacgcgagctcgagcgccctcatcaccgtgcccgagaacgacgaattcaagtac
gtggtgatgccgatgcgcatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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