KEGG   Burkholderia pseudomallei 668: BURPS668_3686
Entry
BURPS668_3686     CDS       T00481                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
bpd  Burkholderia pseudomallei 668
Brite
KEGG Orthology (KO) [BR:bpd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bpd03016]
    BURPS668_3686
Enzymes [BR:bpd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     BURPS668_3686
Transfer RNA biogenesis [BR:bpd03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    BURPS668_3686
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: ABN82738
Position
I:complement(3604886..3605446)
AA seq 186 aa
MTMAGDRLRCFVALTLDRASRDALAALPVAAGARRTPRDQLHVTIAFLGAIERAKSELLG
ARIPALAAAGAVPPVDVERVVCWPSTAHARLVVAELAPQPSLLALGERVGGALRALGLPP
DSRAFKPHVTIARFPRDAHRVTIDGACGAERRTPLALRFETLTLYESVLTRMGAEHRVLA
AAALPA
NT seq 561 nt   +upstreamnt  +downstreamnt
atgacgatggcgggcgaccggttgcgctgcttcgtcgcgctgacgctcgatcgggcgtcg
cgcgacgcgctggccgcgctgcccgtcgccgccggcgcgcggcgcacgccgcgcgaccaa
ctgcacgtgacgatcgcgttcctcggcgcgatcgagcgcgcgaagagcgaactgctcggc
gcgcgcatccccgcgctcgcggcggccggcgcggtgccgcccgtcgacgtcgagcgcgtc
gtctgctggccgagcaccgcgcatgcgcggctcgtcgtcgcggagctcgcgccgcagccg
tcgttgctcgcgctcggcgagcgggtgggcggcgcgctgcgcgcgctcggcctgccgccc
gacagccgtgcgttcaagccgcacgtgacgatcgcgcggtttcctcgcgacgcgcatcgc
gtgacgattgacggcgcgtgcggcgccgagcgccgcacgccgctcgcgttgcggttcgaa
acgctcacgctctacgagagcgtcctcacgcgcatgggcgccgagcatcgggtgctcgcg
gcagcggcgctgccggcataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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