KEGG   Bordetella pseudohinzii: BBN53_00015
Entry
BBN53_00015       CDS       T04945                                 
Name
(GenBank) DNA gyrase subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
bpdz  Bordetella pseudohinzii
Brite
KEGG Orthology (KO) [BR:bpdz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpdz03032]
    BBN53_00015
   03400 DNA repair and recombination proteins [BR:bpdz03400]
    BBN53_00015
Enzymes [BR:bpdz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BBN53_00015
DNA replication proteins [BR:bpdz03032]
 Prokaryotic type
  DNA Topoisomerases
   BBN53_00015
DNA repair and recombination proteins [BR:bpdz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BBN53_00015
SSDB
Motif
Pfam: DNA_gyraseB GyrB_insert DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: ANY14409
UniProt: A0A0J6BY11
Position
2647..5100
AA seq 817 aa
MSDQQNTTPENNGYGADSIKMLKGLEAVRKRPGMYIGDTSDGTGLHHMVFEVVDNAIDEA
LAGYCDDIVVTIHTDNSISVTDNGRGIPTAIHKDDEFGRSAAEIVMTELHAGGKFDQNSY
KVSGGLHGVGVSCVNALSEWLRLTIRRDGQVHEMEFRQGERVAPLAVTGTTDKRGTEVRF
LADPVIFNNIEYHYEILSKRLRELSFLNNGVKIRLIDQRQGKEENFAFSGGVKGFVEYIN
RAKTVLHPNVFAVSTDSSAGGVPVGVEVAMQWNDSYSESVLCFTNNIPQRDGGTHLTGLR
AAMTRVINKYIADNELAKKAKVETTGDDMREGLACVLSVKVPEPKFSSQTKDKLVSSEVR
PAVEDAVARSLETWLLEHPNDAKALCGKIVEAARAREAARKAREMTRRKSVLEGAGLPGK
LADCQEKDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARFDRLIASEQ
IATLITALGTGIGPDFNIEKLRYHRLIIMTDADVDGAHIRTLLLTLLYRQMPELVARGHV
YIAQPPLYKVKVGREERYLKDEVEEAKFMLQLALKDAELIPSQGAAAITGEALGELARQY
VLADAVISRLSRVFDVPALSALAEGVQINLDDQASAEASAKRLHDVLHDATSANGVEVTA
ELEEDSGKYRLVIRRMHHGNVRISIIDADFVRGADYAILTKSAQTFLGLIGAGAIVARGE
GDKRKEQFVSDFREAMQWLRAEAERGLSKQRYKGLGEMNPEQLWETTMDPTVRRLLRVQI
EDAIAADEVFTTLMGDDVEPRRAFIETHALSAGNIDA
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgtcagatcaacagaacaccactcctgagaacaacggctacggcgccgattcgatcaag
atgctcaaggggctggaggccgtgcgcaagcgccccggcatgtacatcggcgacacctcc
gatggcaccggcttgcaccacatggtgttcgaagtggtcgacaacgccattgacgaagcc
ctggccggctattgcgacgatatcgtcgtcaccatccacaccgacaactcgatctcggtc
acggacaacggccgcggcattccgacggccatccacaaggatgacgaattcggccgcagc
gccgccgaaatcgtcatgaccgagctgcatgccggcggcaagttcgaccagaactcctac
aaggtgtccggcggcctgcacggcgtgggcgtgtcctgcgtgaacgcgctgtccgaatgg
ctgcggctgaccatccgccgcgatggccaggtgcacgagatggaattccgccagggcgag
cgcgtcgcgcccctggcggtgaccggcaccaccgacaagcgcggcaccgaggtgcgtttt
ctggccgacccggtcattttcaacaatatcgagtaccactacgagatcctgtcgaagcgc
ctgcgcgagctgtccttcctgaacaatggcgtaaagatccgcctgattgaccagcgccag
ggcaaggaagagaacttcgccttctccggcggcgtgaagggcttcgtcgagtacatcaac
cgcgccaagaccgtgctgcacccgaatgtcttcgcggtgagcacggactcctccgccggc
ggcgtgccggtgggcgtggaagtggccatgcaatggaacgacagctacagcgaaagcgtg
ctgtgcttcaccaacaatattccgcagcgcgatggcggcacccacctgacgggcctgcgc
gcggccatgacgcgggtgatcaacaaatacatcgccgacaacgagctggccaagaaggcc
aaggtcgagaccaccggcgacgatatgcgcgaaggcctggcctgcgtgttgtcggtcaag
gtgcccgagcccaagttcagcagccagaccaaggacaagctggtgtccagcgaagtccgc
cccgcggttgaagacgccgtggcgcgctcgctggagacctggctgctggagcatcccaac
gacgccaaggctttgtgcggcaagatcgtcgaggccgcgcgcgcgcgcgaagccgcgcgc
aaggcgcgcgaaatgacgcggcgcaagagcgtgctggaaggcgccggcctgcccggcaag
ctggccgactgccaggaaaaagaccccgcgctgtgcgaactctacatcgtggagggcgac
tcggcaggcggctcggccaagcaaggccgtgaccgcaagttccaggccatcctgccgctg
cgcggcaaggtgctcaacgtcgagaaggcgcgctttgaccgcctgatcgccagcgaacag
atcgccacgctgatcaccgcgctgggcacgggcatcgggccggatttcaatatcgagaag
ctgcgctatcaccgtctcatcatcatgaccgacgcggacgtcgacggcgcgcatatccgc
acgctgctgctcacgctgctctatcgccagatgccggagctggtcgcgcgcggccacgtc
tatatcgcccagccgccgctctacaaggtcaaggtcggccgcgaagagcgctacctcaag
gacgaggtcgaagaagcgaagttcatgctgcagctggccctcaaggatgccgaactgatc
cccagccagggcgcggccgccatcaccggcgaagccctgggcgagctggcgcgccaatac
gtgctggccgacgccgtgatctcgcgcctgtcgcgggtcttcgacgtgcccgccctgtcg
gccctggccgaaggcgtgcagatcaacctggacgaccaggccagcgccgaggcttcggcc
aagcgcctgcatgatgtcctgcacgacgccaccagcgccaatggcgtggaggtcacggcc
gagctggaggaagacagcggcaaataccgcctggtcatccgccgcatgcaccacggcaat
gtgcgcatcagcatcatcgacgcggacttcgtgcgcggcgcggactacgccatcctgacg
aaatcggcccagaccttcctgggcctgatcggcgccggcgccatcgtggcccgcggcgag
ggcgacaagcgcaaggagcagttcgtctccgacttccgcgaagccatgcagtggctgcgc
gccgaggccgagcgcggcttgtccaagcagcgctacaagggcctgggcgaaatgaatccc
gagcagctctgggaaaccaccatggaccccaccgtgcgccgcctgctgcgcgtgcagatc
gaggacgccatcgcggccgacgaggtcttcaccaccctcatgggcgacgatgtggagccg
cgccgcgccttcatcgagacgcatgcgctgtcggcgggcaatatcgacgcctga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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