KEGG   Bordetella pseudohinzii: BBN53_05385
Entry
BBN53_05385       CDS       T04945                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bpdz  Bordetella pseudohinzii
Pathway
bpdz02024  Quorum sensing
bpdz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bpdz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BBN53_05385
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BBN53_05385
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpdz03019]
    BBN53_05385
   03036 Chromosome and associated proteins [BR:bpdz03036]
    BBN53_05385
Messenger RNA biogenesis [BR:bpdz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BBN53_05385
Chromosome and associated proteins [BR:bpdz03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BBN53_05385
SSDB
Motif
Pfam: Hfq LSM SRP14
Other DBs
NCBI-ProteinID: ANY15371
UniProt: A0A0J6C0D2
Position
1200841..1201077
AA seq 78 aa
MSNKGQTLQDPFLNTLRKEHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAI
STVVPARAVNFQVEVPAE
NT seq 237 nt   +upstreamnt  +downstreamnt
atgagcaataaagggcaaactttgcaagatccgtttctgaatacgctgcgcaaggaacac
gtgccggtgtcgatctatctggtaaacggcatcaagcttcaggggcagatcgagtctttt
gatcagtatgttgtgctcttgcgcaacactgttacccagatggtttacaagcacgccatc
tcgaccgtcgttccggcccgcgcagtcaactttcaggtggaagttcccgctgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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