KEGG   Bordetella pertussis Tohama I: BP2914
Entry
BP2914            CDS       T00139                                 
Name
(GenBank) putative RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
bpe  Bordetella pertussis Tohama I
Brite
KEGG Orthology (KO) [BR:bpe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpe03021]
    BP2914
Transcription machinery [BR:bpe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BP2914
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_28
Other DBs
NCBI-ProteinID: CAE43186
UniProt: Q7VV01
Position
complement(3104552..3105079)
AA seq 175 aa
MRPEDEALIVACIPSLRRYARGLTGERDRADDLVQDTLERAWSRFSRWQRRGELRAWMFG
IMHNQFIDGLRAQKRQADYGAETEIPELPVRATQADRLEVRDLDRHLQRLPADLRAVLLL
VAVEEFTYREAAQVLEVPIGTVMSRLSRARERLAALLQAQARAPAASTVQRIRAT
NT seq 528 nt   +upstreamnt  +downstreamnt
atgcgccccgaagacgaggccctgatcgtggcctgcatccccagcctgcgccgctacgcg
cgcgggctgacgggcgagcgcgaccgggccgacgacctggtccaggacacgctggaacgt
gcctggagccggttttcgcgctggcagcggcgcggggagttgcgcgcctggatgttcggc
atcatgcacaatcaattcatcgacggcttgcgggcgcaaaagcgccaggccgattacggg
gctgagaccgagatcccggagctgcccgtgcgcgcgacccaggccgaccggctcgaagtg
cgcgacctggaccggcacctgcaacggctgccggcggacctgcgcgcggtgctgctgctg
gtcgccgtcgaggagttcacctaccgcgaagccgcgcaggtgctggaggtgccgataggc
accgtcatgtcccgcctgtcgcgcgcgcgcgagcgcctggccgcgctgctgcaggcccag
gcccgggcgccggccgccagcaccgtccagcggatcagagccacatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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