KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110158217
Entry
110158217         CDS       T05002                                 
Symbol
pold1
Name
(RefSeq) DNA polymerase delta catalytic subunit
  KO
K02327  DNA polymerase delta subunit 1 [EC:2.7.7.7]
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03030  DNA replication
bpec03410  Base excision repair
bpec03420  Nucleotide excision repair
bpec03430  Mismatch repair
bpec03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    110158217 (pold1)
   03410 Base excision repair
    110158217 (pold1)
   03420 Nucleotide excision repair
    110158217 (pold1)
   03430 Mismatch repair
    110158217 (pold1)
   03440 Homologous recombination
    110158217 (pold1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpec03032]
    110158217 (pold1)
   03400 DNA repair and recombination proteins [BR:bpec03400]
    110158217 (pold1)
Enzymes [BR:bpec01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     110158217 (pold1)
DNA replication proteins [BR:bpec03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    110158217 (pold1)
DNA repair and recombination proteins [BR:bpec03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      110158217 (pold1)
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     110158217 (pold1)
SSDB
Motif
Pfam: DNA_pol_B DNA_pol_B_exo1 zf-C4pol DNA_pol_B_2 DNA_pol_B_exo2 divDNApol
Other DBs
NCBI-GeneID: 110158217
NCBI-ProteinID: XP_020778320
Position
Unknown
AA seq 1103 aa
MDFKRRNGGLPGGGSQAKKGKTGGEWEDSPSQFEEELSMFDDAEMDMEDMEGQAGHDVIP
VGDLFSADLNPRWRRPPAPTINPATDTLVFQQIDLDYYLGTAVAGMPGQTQGKVPIIRMF
GVTDSGNSVCCHIHGFAPYFYVPAPPGFKSDYLGEFQRELNSVVLKDMRSNKDNISVTVL
AVDITRKESMYGYHGKRILDFLKITMAMPRLIAPAKRLLEQGFKFGPFALQSYQSYEANI
DFEIRFMVDCDVVGCCWIELPKNKFRVREEKSAGGSSQYPGKVSLCQYEVDVGWNDMISH
PAEGDWQRIAPLRVLSFDIECAGRKGIFPEADKDPVIQIASMVQRQGETEPFIRTVFTLQ
SCASIVGSQILCFTQEKQLLQSWAEFLRTVDPDIITGYNIQNFDFPYLLNRAAALKVNLF
PYLGRVRGIKSVLKDLNFQSKQMGRRENKTINMEGRVQFDLLQVLLRDYKLRSYTLNAVS
FHFLQEQKEDVQHSIITDLQNGNEQTRRRLAVYCLKDAYLPLRLLQKLMCVINYMEMARV
TGVPLTYLLSRGQQIKVVSQLLRQAMKQDLVMPVVRTEGGEDYTGATVIEPEKGYYSIPI
ATLDFSSLYPSIMMAHNLCYTTLLQRGAVEKLGLSSDEFIKTPTGDMFVKSSVRKGLLPE
ILENLLSARKRAKAELKKETDPFKKQVLDGRQLALKISANSVYGFTGAQVGKLPCLEISQ
SVTGFGRQMIEQTKQLVESKYTIANGYEADAKVIYGDTDSVMVKLGVATVREAMDIGKEA
AEWVSSHFTQPIKLEFEKVYFPYLLINKKRYAGLYFSSSADTHDKMDCKGIETVRRDNCP
LVANLINTCLQKILIDRDPQGAVDHAKEVISDLLCNRIDISQLVITKELTRTAQEYAGKQ
AHVELAERMRKRDAGSAPNLGDRVPYVIIKAAKGAAAYMKSEDPIYVLENNIPIDTQYYL
DQQLAKPLLRIFEPILGETKAESVLLKGDHTRCKTVLTSKVGGLMAFAQKRSTCIGCKAV
LKTDAAVCDFCKKKESELYQKEIFHLNALEERFSRLWTQCQRCQGSLHEDVLCTSRDCPI
FYMRKKVQFDLDDQSKLVSRFGW
NT seq 3312 nt   +upstreamnt  +downstreamnt
atggattttaaaagacgtaatgggggtcttcctggtgggggatcccaggccaaaaagggt
aagacaggcggggaatgggaagacagtccatctcagttcgaagaggagctgtctatgttc
gacgatgcagagatggacatggaagacatggagggacaggcgggacacgatgtcattcct
gtgggtgacttgttctctgctgacctgaatcctcgctggcgacgacctccagctcccact
ataaaccctgcgacagacactttggttttccagcagatagacctggactattatttaggc
acagcagttgcaggcatgccgggtcagacacagggaaaagtgcccatcatccggatgttt
ggtgtgacagacagtggcaatagtgtgtgctgtcatatccatggatttgctccctacttc
tatgtgcctgctccaccaggtttcaagtctgattacttgggagaatttcaaagagaatta
aactctgtggtgctaaaagacatgcgctccaataaggataacatctctgtcactgtgctg
gctgtagacatcacccgcaaagagagtatgtatggttatcacgggaaacgcattctcgat
ttcctaaagatcaccatggcaatgcctcgtcttatcgctccagccaagagactcctggag
cagggctttaagtttgggccttttgcccttcagagttaccaatcctatgaggccaacatc
gattttgaaatcaggttcatggtagattgtgacgttgtgggctgctgttggattgaactc
cccaaaaacaagttcagagttcgggaggagaagagcgcgggagggtcgtctcagtacccg
ggcaaggtttccttgtgtcaatatgaagtggatgtgggctggaatgatatgataagtcac
ccggcggagggggactggcagcggattgcaccactcagagttctgagctttgatattgag
tgtgcagggagaaaaggaatcttcccagaggcagacaaggatcctgtcattcagattgcc
tccatggtccagcgacagggcgagacagagccattcatccgcacagtgttcaccctgcag
tcctgtgccagcatcgtgggctcccaaatcctctgttttacacaagaaaaacagctactc
cagagttgggccgagtttttgcggacagtggatccagacatcataactggatacaatatt
cagaactttgactttccatatttgctgaatagggctgctgctttgaaggtcaacctgttc
ccttacctgggccgagtgcgagggatcaagtctgtgttgaaagatctaaactttcagagt
aaacagatggggaggcgtgaaaacaaaactataaacatggagggacgtgttcagtttgat
ctgctgcaggttcttctcagagactataaacttcgctcatacacactaaacgctgtcagc
ttccactttttacaagaacaaaaagaggatgtccagcattctatcatcactgacctacag
aacggtaatgagcagacccgtcgccgtttagctgtgtactgtctgaaagacgcctacctg
ccactgcgactgctgcagaagctgatgtgcgtgatcaactatatggagatggcgagggtg
accggggtgccattgacctacctgctctccagagggcagcagatcaaagttgtgtctcag
ctactgcgacaggcgatgaaacaggacctggtcatgcctgtggtgagaactgagggaggc
gaagattatacaggagccactgttattgagccagaaaaaggatattacagcattcccatt
gctactctggatttttcctctctgtatccgtctatcatgatggctcacaacctatgctac
accacactgctgcaaagaggagctgtggagaaactggggctttcatctgatgagtttatc
aagactcccacaggggacatgtttgtgaagagctctgtgaggaaaggtctacttcctgaa
attttggagaacctgctgtctgccagaaaaagagcaaaggccgaactcaagaaggaaact
gacccattcaagaaacaagtgctggacggtcgacagctcgctctcaaaatcagtgccaac
tctgtgtacggattcaccggggctcaagtcggcaagctcccatgtcttgaaatctcccag
agtgtgactggatttggaagacagatgattgagcagacgaaacagcttgtcgagtccaag
tacaccatcgccaacgggtatgaagctgatgccaaggtcatttatggagatacagattct
gttatggttaagctcggtgttgccacggtgagagaagccatggatatcgggaaggaggcg
gccgagtgggtttcatctcatttcacacagccaatcaaactggaatttgaaaaggtgtac
tttccatatctgctgatcaacaagaagcgatacgcagggctgtacttctcctccagtgct
gacactcacgacaagatggactgtaaaggaattgagaccgtgcggagagacaactgccct
ctagtggctaatctcatcaacacatgtctccagaaaattttgatagacagagacccgcag
ggagccgtagaccacgccaaagaagtcatctcagatctgttgtgcaaccgcatagacatc
agccagctggtgatcaccaaagagctgacgcgcacagcccaggagtacgctggcaaacag
gcccacgtggagcttgctgagagaatgagaaaaagagacgcaggtagtgcccctaatttg
ggagaccgagttccctatgtcatcattaaagcggcgaaaggagcagctgcgtatatgaaa
tcagaggatcctatctacgtgctggagaacaacattcccatcgacactcagtactacctg
gaccagcagctggccaagcccctcttgagaatatttgagcctattttaggggaaaccaaa
gcagaaagcgtcctgcttaagggcgaccatacccgctgtaaaaccgtgctgacctcaaag
gtgggaggcctcatggcgtttgcccagaagaggagcacctgcatcggctgcaaagctgtg
ctcaaaacagatgcggctgtgtgtgatttctgtaagaagaaggaatctgaactttaccag
aaggagattttccacctaaatgccttggaggaacggttttcccgtctgtggacccagtgc
cagagatgtcaagggtctcttcacgaggatgtgttgtgtacgagtcgggactgtccgatt
ttctacatgcgtaaaaaggttcagtttgacctggacgatcagagcaaactggtgtcacgt
tttggctggtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (46)   

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