KEGG   Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110172211
Entry
110172211         CDS       T05002                                 
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
bpec  Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bpec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110172211
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bpec03041]
    110172211
   03009 Ribosome biogenesis [BR:bpec03009]
    110172211
Enzymes [BR:bpec01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     110172211
Spliceosome [BR:bpec03041]
 Complex A
  U1 snRNP components
   U1 related factors
    110172211
 Complex B
    110172211
Ribosome biogenesis [BR:bpec03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    110172211
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_C_2 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 110172211
NCBI-ProteinID: XP_020793700
Position
Unknown
AA seq 627 aa
MPGYSDRDRDRRDRGSYGGGGARFGGNRGGGGGGGGXXXXXXXXXXXXXXXXXXXXXXXX
XXXXLDELPKFEKNFYQPHPDLTRRSMVRGGQRVHEITVKGRDCPNPITKFTEATFPSYV
MDVISKQNWTEPTPIQAQGWPLALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERG
DGPICLVLAPTRELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATP
GRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE
VRQLAEDFLKDYVQINVGALQLSANHNILQIVDVCNDGEKEDKVIRLLEEIMSEKENKTI
IFVETKRRCDDLTRRMRRDGWPAMGIHGDKSQQERDWVLNEFKYGKAPILIATDVASRGL
DVEDVKFVINFDYPNNSEDYIHRIGRTGRSEKTGTAYTFFTPNNFKQAGDLISVLREANQ
AINPKLLQMAEDRGGRSRGGRGGGYRDDRRDRYSGKRDFGSFRDRDNGRGYDSGPNKSFG
SNTQNGGYGGGNTNSYNSYNGNGQPGFNSQPGNFGAQNGFQPQQFGPPKGPAQNGTNHPP
FPFPQAQAQQHPPPPLVTYPMAPPFPQ
NT seq 1884 nt   +upstreamnt  +downstreamnt
atgcccggctactcggacagagatcgcgaccgcagagacagaggcagttatggcggcggc
ggtgcccggtttggtgggaaccgtggcggcggcggcggcggaggaggagannnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnacctggacgagctgccgaagtttgagaagaacttctaccagccgcacccg
gacctcacccgcaggtctatggtacgtggggggcagcgggttcacgagattacggtaaaa
ggaagagactgtccaaaccccatcacaaagttcacagaggccacttttccatcttatgtg
atggacgtaatcagcaaacagaactggactgaacccactcccattcaggctcagggctgg
cctttggctctcagtgggaaagacatggtgggcattgctcagactggttctgggaaaact
ttatcgtacctcctccccgctattgtgcacatcaaccaccaaccatttctggaacgtgga
gatggacccatttgcttggttttggctcccacccgtgagctggcgcagcaggtgcagcag
gtggcagcagagtatggcagagcttctcgcctcaaatccacctgcatatacggaggagcg
ccaaaaggacctcagatacgggacttggagagaggtgtggagatctgcatcgctactcct
ggaagactcatcgacttccttgaatctggaaagaccaaccttcgccgctgcacttacctt
gtcctggatgaagcagacagaatgctcgatatgggctttgaaccgcagattcgtaaaatt
gtcgatcaaatcaggccggaccgtcagacgctgatgtggagtgccacctggcccaaagag
gtgcgacagctcgcagaggactttctcaaagactacgttcagatcaatgttggagctctt
caactcagcgcaaaccacaacatcctgcagatcgtagatgtctgcaacgatggagagaaa
gaggacaaagtcatccgtctgctggaagaaatcatgagcgaaaaggaaaacaagactatt
atatttgtggagacaaagaggcgttgtgatgacctcaccaggaggatgcgtagagatggg
tggcctgcaatgggtatccatggagacaaaagccagcaagaaagggactgggtcctcaat
gagttcaaatacggaaaggcacccatcctcattgccacagatgtagcctccaggggtcta
gatgttgaagacgtcaaatttgtcatcaactttgattaccccaacaactctgaggactat
atccaccgcattgggcgaacaggacgtagtgaaaagacaggcacagcctacaccttcttc
acccccaacaacttcaaacaggccggcgacctcatctctgtgctcagagaggccaaccaa
gctatcaaccccaagctcctccagatggccgaggacagaggaggtcgttcaaggggcggg
agaggtggcggctacagagatgaccggcgcgataggtattcaggcaaacgtgatttcggt
agttttagagacagggacaacggtagaggatatgacagtggacctaacaaaagctttggc
tcaaacacccaaaacggaggctatgggggaggcaacaccaacagctacaacagctacaac
ggtaacggacagcccggcttcaacagccagccaggaaactttggagcccagaacggcttc
cagccacaacagttcggacctccaaaaggtcccgcgcagaacggcaccaatcacccaccc
ttccctttcccccaggcccaggcgcagcagcaccctccccctccgctggtgacctacccc
atggctccaccattcccacagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (29)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (44)   

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