KEGG   Bordetella pertussis 18323: BN118_1334
Entry
BN118_1334        CDS       T02296                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
bper  Bordetella pertussis 18323
Pathway
bper00010  Glycolysis / Gluconeogenesis
bper00020  Citrate cycle (TCA cycle)
bper00260  Glycine, serine and threonine metabolism
bper00280  Valine, leucine and isoleucine degradation
bper00310  Lysine degradation
bper00380  Tryptophan metabolism
bper00620  Pyruvate metabolism
bper00630  Glyoxylate and dicarboxylate metabolism
bper00640  Propanoate metabolism
bper00785  Lipoic acid metabolism
bper01100  Metabolic pathways
bper01110  Biosynthesis of secondary metabolites
bper01120  Microbial metabolism in diverse environments
bper01200  Carbon metabolism
bper01210  2-Oxocarboxylic acid metabolism
bper01240  Biosynthesis of cofactors
Module
bper_M00009  Citrate cycle (TCA cycle, Krebs cycle)
bper_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bper_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
bper_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:bper00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    BN118_1334 (lpdA)
   00020 Citrate cycle (TCA cycle)
    BN118_1334 (lpdA)
   00620 Pyruvate metabolism
    BN118_1334 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    BN118_1334 (lpdA)
   00640 Propanoate metabolism
    BN118_1334 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    BN118_1334 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    BN118_1334 (lpdA)
   00310 Lysine degradation
    BN118_1334 (lpdA)
   00380 Tryptophan metabolism
    BN118_1334 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    BN118_1334 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bper04147]
    BN118_1334 (lpdA)
Enzymes [BR:bper01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     BN118_1334 (lpdA)
Exosome [BR:bper04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   BN118_1334 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA FAD_binding_2 Biotin_lipoyl_2 FAD_binding_3 Thi4 NAD_binding_8 GCV_H
Other DBs
NCBI-ProteinID: CCJ62759
UniProt: A0A0U1RNB3
Position
1458141..1459916
AA seq 591 aa
MSNIVEIKVPDIGDFKEVEVIEVLVAAGDTIKAEQSLITVESDKASMEIPASSAGVVKSV
KVKVGDKVAEGTVILDVEAAGEAAAAPKAEAPKAEAPKADAPKAPAAKASAPAAAAYSGS
ADLECDMLVLGAGPGGYSAAFRAADLGMDTVMVERYATLGGVCLNVGCIPSKALLHNAAV
IDEARALAAHGISFGEPKVDLDKLRGYKDSVVAKLTGGLAGMARARKVRVVTGTGEFADP
HHLTVTDGEGKKQTIRFKQAIIAAGSQSVKLPFLPDDERIVDSTGALQLRAIPKKMLIVG
GGIIGLEMGTVYSTLGARLDVVEMLDGLMQGADRDLVKVWQKMNAPRFDNIMLKTKTVGA
EARKDGIYVSFEGEGAPKEPQRYDLVLQAVGRSPNGKKIGAERAGVAVTERGFIEVDRQM
RTNVPHIYAIGDVVGQPMLAHKAVHEGHVAAEAAHGEKSYFDARVIPSVAYTDPEVAWVG
LTEDEAKKQGVKVEKGLFPWAASGRAIANGRDEGFTKLLFDAETHRIVGGGIVGTHAGDL
ISEIALAIEMGADMVDIGKTIHPHPTLGESVGMAAEVAEGVCTDLPPMRKK
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgagcaatatcgtggaaatcaaggtgcccgacatcggtgacttcaaggaagtcgaagtc
atcgaggtgctggtcgccgccggcgacaccatcaaggccgagcaaagcctgatcacggtc
gagtcggacaaggcgtcgatggaaatcccggcctcgtcggcgggcgtggtgaaatcggtc
aaggtcaaggtgggcgacaaggtcgccgagggcacggtcatcctggacgtggaggcggcc
ggcgaggccgccgccgcgcccaaggccgaggcgcccaaggccgaggcgccgaaggcggat
gcaccgaaggcgccggccgccaaggcgagcgcgccggccgcggccgcctacagcggctcg
gccgacctcgaatgcgacatgctggtgctgggcgcgggccccggcggctattcggccgcc
ttccgcgccgccgacctgggcatggacaccgtgatggtcgagcgctacgccaccctgggc
ggcgtgtgcctgaacgtgggctgcattccctccaaggcgctgctgcacaacgccgcggtg
atcgacgaagcgcgcgcgctggccgcccatggcatcagcttcggcgagcccaaggtcgac
ctggacaagctgcgcggctacaaggacagcgtggtcgccaagctgaccggcggcctggcc
ggcatggcccgcgcgcgcaaggtgcgcgtggtcaccggcacgggcgagttcgccgacccg
caccacctcacggtgaccgacggcgagggcaagaagcagaccatccgcttcaagcaggcc
atcatcgccgccggcagccagtcggtgaaactgccgttcctgcccgacgacgaacgcatc
gtggactccaccggcgcgctgcagctgcgcgccatccccaagaagatgctgatcgtcggc
ggcggcatcatcggcctggaaatgggcacggtgtactccaccctgggcgcgcgcctggac
gtggtggaaatgctcgacggcctgatgcagggcgccgaccgcgacctggtcaaggtgtgg
cagaagatgaacgcgccgcgcttcgacaacatcatgctcaagaccaagacggtaggcgcc
gaggcccgcaaggacggcatctacgtcagcttcgagggcgagggcgcgcccaaggagccg
cagcgctacgacctggtgctgcaggccgtgggccgcagccccaacggcaagaagatcggc
gccgagcgcgccggcgtggccgtcaccgagcgcggcttcatcgaggtggaccgccagatg
cgcaccaacgtgccgcacatctacgccatcggcgacgtggtcggccagcccatgctggcc
cacaaggccgtgcacgaaggccacgtggcggccgaggcggcccatggcgagaagtcgtac
ttcgacgcgcgcgtcattccgtcggtggcctacaccgatccggaagtggcctgggtgggc
ctgaccgaggacgaggcgaagaagcagggcgtcaaggtcgagaagggcctgttcccgtgg
gcggcctccggccgcgccatcgccaacggccgcgacgagggcttcaccaagctgctgttc
gacgccgagacccaccgcatcgtcggcggcggcatcgtcggcacgcacgcgggcgatctc
atcagcgaaatcgccctggccatcgaaatgggcgcggacatggtcgacatcggcaagacc
atccacccgcatccgaccctgggcgaatccgtcggcatggccgccgaagtcgccgaaggc
gtgtgcaccgacctgccgccgatgcgcaagaagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (81)   

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