KEGG   Bordetella pertussis B1917: B1917_1859
Entry
B1917_1859        CDS       T03638                                 
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
bpet  Bordetella pertussis B1917
Pathway
bpet03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bpet00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    B1917_1859 (uvrC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpet03400]
    B1917_1859 (uvrC)
DNA repair and recombination proteins [BR:bpet03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B1917_1859 (uvrC)
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH_5 UVR HHH_2 HHH DRTGG
Other DBs
NCBI-ProteinID: AIW92233
Position
1979172..1981001
AA seq 609 aa
MPDDFNLKSFLADLPHLPGVYRHLDAAGEAMYVGKARDLKKRVSSYFQKNLASPRIAQMV
AKVASVDVTVTRSEAEALLLENNLIKSLRPRYNILFRDDKSYPYLLITGHAWPRIAYYRG
ATSKRGQYFGPYPNSWAVRETIQILQKVFRLRTCEDTVFANRSRPCLLHQIGRCSAPCVG
VIEAEDYAHDVQRAVRFLNGEAREVMDEIEARMLQASTELRFEEAAVLRDQMGSLSKVLH
QQTMENVGGDDTDVIAVASAGGKICVNLAMVRGGRHLGDKPFFPTHAEGEQPAQVLEAFV
AQHYADGAMPPVLVCSHALPDSGLVGLLAEQGGTRVARVLTRPQGVRRSWLEQAQKNAEM
ALARALTESGARAGRTLALAEALDLDTDEESLDALRIECFDISHTAGEATQASCVVFLHH
DMQPSLYRRYNIVGITPGDDYAAMRQVLTRRFGKVTDGEAPMPGLVLIDGGKGQVEVARQ
VFVELGLDIQSLVGVAKGEGRKVGLETLVFADGRPPVALGKESAALMLIAQVRDEAHRFA
ITGMRARRAKTRNVSRLEEIEGIGARRRQRLLARFGGLSGVSSASIEDLASVEGISQELA
VRIYDALHG
NT seq 1830 nt   +upstreamnt  +downstreamnt
atgcccgacgacttcaatctcaaatcgtttctggctgacctgccgcacctgcccggcgtg
taccggcatctcgatgccgccggggaggcgatgtatgtcggcaaggcgcgcgatctcaag
aaacgcgtatcgtcgtatttccagaagaacctggccagcccgcgcattgcgcagatggtg
gccaaggtggccagcgtggacgtcaccgtcacgcgttcggaggccgaggcgctgctgctc
gagaacaacctcatcaagagcctgcggccgcgctacaacatcctgttccgcgacgacaag
tcgtatccctatctgctgatcaccggccacgcgtggccgcgcatcgcgtattaccgcggc
gccaccagcaagcgggggcagtacttcggcccgtaccccaattcgtgggccgtgcgcgag
accatccagatcctgcagaaagtgttccgcctgcgcacctgcgaggacacggtcttcgcc
aatcgctcgcgtccctgtctgctacaccagatcggccgttgttcggcgccgtgcgtgggc
gtgatcgaggccgaggactacgcccacgacgtgcagcgcgccgtgcgctttctcaacggc
gaggcgcgcgaagtcatggacgagatcgaagcccgcatgctgcaggcctcgaccgagctg
cgcttcgaggaagcggcggtgctgcgcgaccagatgggctcgctgtccaaggtgctgcac
cagcagaccatggaaaacgtcggcggcgacgacaccgatgtgatcgccgtggcgtcggcc
ggcggcaagatctgtgtcaacctggccatggtgcgcggcgggcgccacctgggcgacaag
ccgttctttcccacgcatgccgagggcgagcagccggcccaggtgctggaggccttcgtg
gcgcagcattacgccgacggcgccatgccgcccgtgctggtctgttcgcacgcgctgccc
gacagcggcctggtcggcctgctggccgagcagggcggcacccgcgtggcccgggtgctg
acccgtccgcagggcgtgcgccgctcatggctggagcaggcgcagaaaaacgccgagatg
gcgctggcgcgggcactgaccgaatcgggcgcgcgcgccgggcgcaccctggcgctggcc
gaggcgctggatctcgataccgacgaggagtcgctcgatgctttgcgcatcgaatgcttc
gatatcagccacaccgccggcgaagcgacgcaggcctcgtgcgtggtgttcctgcatcac
gacatgcagccgtcgctgtatcgccgttacaacatcgtgggcattaccccgggcgacgat
tatgcggcgatgcggcaggtgctgacgcgccgcttcggcaaggtgaccgacggcgaggcg
cccatgccggggctggtgctaatcgacggcggcaagggccaggtcgaggtggcccgccag
gtgttcgtcgaactcgggctggacatccagtccctggtgggggtggccaagggggagggc
cgcaaggtggggctggaaaccctggtgttcgccgacgggcggccgcccgtcgcgctgggc
aaggaatcggcggccctgatgctgattgcgcaggtgcgcgacgaggcgcaccgctttgcc
atcaccggcatgcgcgcgcgccgcgccaagacgcgcaatgtctcgcgcctggaagaaatc
gaagggatcggggcgcgccggcgccagcggctgctggcgcgctttggcggcctgtcgggc
gtcagttcggccagcatcgaagacctggcttcggtcgagggtatttcgcaggaattggcc
gtgcgcatctatgatgcgctgcatggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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