KEGG   Paraburkholderia phymatum: Bphy_1341
Entry
Bphy_1341         CDS       T00704                                 
Name
(GenBank) RNA-binding S4 domain protein
  KO
K06182  23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
Organism
bph  Paraburkholderia phymatum
Brite
KEGG Orthology (KO) [BR:bph00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:bph03009]
    Bphy_1341
Enzymes [BR:bph01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.21  23S rRNA pseudouridine2604 synthase
     Bphy_1341
Ribosome biogenesis [BR:bph03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Bphy_1341
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: ACC70523
UniProt: B2JIC9
Position
1:1502266..1504140
AA seq 624 aa
MRVKLTAKHPRPASSERAPVRSGSTTARKPTRPAAPADKPAAQRKPRSDAGSAAGAPAAR
RGTASGEGTKRPATRSNAAGAPGERRGPSTGGRNGAPARSGDRPARAAGTGSRERGLAER
GASASFDRRPPGDRPARKEGASAGTGFRRDGDARTNARTSSDRPSRSGAASRAGERAPRF
SRDDDARVARRTAPDSDDGRRAPRPPRESDDVRRAPRTARTEGTPSRERTERRYRDDAPE
GRTTRSPRGERSEARGERSYARPARAAYEDRGAAPERRPRGEGAPRRSREDVAEGRSERT
YAKPVKAVYADRASDAPPKAAPRATKTKRDTRSVEDSFDRPARFDRPAEKTSRKPRPAAA
SRQRDEGEYNDAPGNLRLSKLMSELGLCSRREADEWIEKGWVTVDGVVVDKLGTKVRPDA
DIQIDPAAQAAQQKQVTILVHKPVGYVSGQAEDGYEPAVTLVKPENRWDGDRTDIRFSAV
HLRQLAPAGRLDIDSTGLLVLTQDGRIAKQLIGGHSEIDKEYLVRVSYGDIETDVEHEFP
AESLAKLRHGLELDGVPLKPAMVSWQNGEQLRFVLREGKKRQIRRMCELVGLHVVGLKRV
RMGHVMLGALPPGQWRYLGPDESF
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgcgagtcaaactgacagccaagcatccgcggccggcttcgtccgaacgcgcccctgtg
cgttcgggcagcacgactgcccgcaagccgactcggccggccgccccggcagacaaaccc
gctgcgcagaggaagccgcgcagcgacgccggttcggcggcgggcgcacccgctgcacgc
cgtggcaccgcttcgggcgaagggacaaagcgcccggccacgaggagcaacgcggccggc
gcgccgggggagcggcgcggcccgtcgacgggcgggcgcaacggcgcgcccgctcgctcc
ggcgaccgtccggcgcgcgccgcgggcacgggctcacgcgagcgcggccttgccgaacgt
ggcgcttccgcttcgttcgatcgccgtccgccgggcgatcggccggcacgcaaggaaggc
gcttccgccggcacgggtttccgtcgggacggggacgcgcgaaccaacgcgcgcacttcg
tcagatcgtccgtcgcgcagcggcgcggcgtcgcgtgctggcgaacgcgcaccgcgcttc
tcccgtgacgacgatgcacgggtcgcacgacgtacggcgcccgacagcgatgacggccgg
cgcgctccgcgcccgccgcgagagagcgatgacgttcgccgcgcgccgcgcacggcgcgt
accgaaggtacgccttcgcgcgaacgcacggaacgacgctaccgtgacgacgcccccgaa
ggccgcacgacgcgctcgccgcgcggcgagcgatccgaagcacgcggtgaacgcagctat
gcgcgcccggccagggctgcctacgaagatcgcggcgcagcgccggaacgccgcccacgc
ggcgaaggtgcaccgcgccgcagccgcgaagacgtcgcagaaggtcgcagcgaacgcact
tacgcaaagcccgtgaaggccgtctacgcggaccgcgccagcgacgctccgccgaaggcc
gcaccgcgcgccacgaagaccaaacgcgacacccgctcggtcgaagacagctttgaccgt
ccggcgcgcttcgaccgccccgctgaaaagacgtcacgcaagccccgcccggccgccgcg
tcgcgtcaacgcgacgaaggcgaatacaacgacgcccccggcaatctgcgcctgtcgaaa
ctgatgtccgaactcggcctgtgctcgcgccgcgaagccgacgaatggatcgaaaaaggc
tgggttaccgtcgacggcgtcgtcgtcgataagctgggcacgaaggtccgccccgacgcc
gatatccagatcgacccggccgctcaggcagcccaacagaaacaggtgacgatcctcgtg
cacaagccggtcggctatgtgtcgggtcaggcggaagatggctacgagcctgccgtgacg
ctcgtcaaaccggagaaccgctgggacggcgaccgtactgatatccgtttctcggctgtc
catttgcgacaactggcgcctgcgggacgcctcgatatcgattcgacggggctgctcgtg
ctgactcaggacggccgcatcgcgaagcagctgatcggcgggcactcggagatcgacaag
gagtatctggtgcgcgtcagctacggcgacatcgaaacggacgtcgagcatgagttcccc
gccgagagtctggccaaactgcgccacggcctcgaactcgacggcgtgccgctcaaaccc
gctatggtcagctggcaaaacggcgagcaattgcgcttcgtgctgcgtgaaggcaagaaa
cgccagattcgccggatgtgcgaactggtcgggctgcatgtcgtgggcctcaagcgcgtg
cggatgggccacgtgatgctcggcgccttgccgcccggacagtggcgctacctcggtccg
gacgagtcgttctaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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