KEGG   Brachyspira pilosicoli B2904: B2904_orf381
Entry
B2904_orf381      CDS       T02225                                 
Name
(GenBank) exoribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
bpj  Brachyspira pilosicoli B2904
Pathway
bpj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bpj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    B2904_orf381
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpj03019]
    B2904_orf381
   03016 Transfer RNA biogenesis [BR:bpj03016]
    B2904_orf381
Enzymes [BR:bpj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     B2904_orf381
Messenger RNA biogenesis [BR:bpj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     B2904_orf381
Transfer RNA biogenesis [BR:bpj03016]
 Prokaryotic type
  tRNA degradation factors
   B2904_orf381
SSDB
Motif
Pfam: RNB S1 ParM_N
Other DBs
NCBI-ProteinID: AFR69736
UniProt: J9UAY3
Position
359383..361113
AA seq 576 aa
MKTIEELIAKLSKNQMDYNVFIKFNAKTPLEKTSLTNLIRKAISDGYIQKTDSNLLKLTK
AGHLFINPNSANKEAVKTPVHAKKININIDDAKLDSEIIADAYNIKLNFSDDLLKLAENI
NNNANFNDTTDRVDLRSLKTVTIDSEHSKDLDDAFSIERVDDNYKVYVHISDVSNFIEHN
SHLDIEAKKRGNSTYLIDKVYNMFPEILSNEIISLNEKVDRFTLTLICVIDKDGNILESD
VVKSIINSDKKLSYNYAEDIINKKANDEDWLMELINNALEVKNILHKKRSKGVDFENDDI
NIVLDDNGVPIEFYAEEKKESMLIIESLMLLANSEIAKKLKDYEGVIYRYHGAPDNYRFN
NFKILAHNKGYELKKLDEDNYDLIDFLEKIKGKSEEKLLTGVLMRSMTPSSYSVINKSHF
GLGFDYYTYFTSPIRRYVDLTIHRIVKDYIIDKKTYTNDDNKYKSVADECTLLDRTSKKA
ERNLRQIKAARYMKDRLGDEYYGFISLLSRNGITVEIEGLDIEGFIEATYVGANYRFYDD
MQSIYIDKVKMYELGDRVKIFVVKANIETGKIYFSL
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgaaaaccatagaagagcttatagcaaaattgtctaaaaaccaaatggactataatgta
tttataaaattcaatgccaaaactccattagaaaaaacttctcttactaatttaataaga
aaagcaatcagtgacggatatatacaaaaaactgatagcaacttacttaagctaactaaa
gctggtcatttatttataaacccaaatagtgccaacaaagaagctgtaaaaactcctgtt
catgctaaaaaaataaatattaatatagatgatgcgaaattagattcagaaataatagca
gatgcttataatattaaattaaacttttctgatgatttattgaagttagcagaaaatatt
aataacaatgctaattttaatgatactactgatagggttgatttgaggagtttaaaaact
gttacaatagactcagagcattcaaaagacttagatgatgcattcagtatagaaagggta
gatgataattataaagtgtatgtgcatatttctgatgtcagcaattttatagaacataac
tctcatcttgacatagaagcaaaaaaaagaggaaactcaacctatttaatagataaagta
tataacatgtttccagagattctttcaaatgaaataatttcactcaatgaaaaagttgat
agatttactttaactttaatttgtgttatagataaagacggaaatattttagagagtgat
gttgttaaaagcattataaactcagacaaaaaattatcctacaattacgcagaagatatt
ataaacaaaaaggctaatgatgaagattggcttatggaactaataaataatgctttggaa
gtaaaaaacatattgcataaaaaaagaagcaagggtgtagactttgagaatgatgatatt
aatatagtattagatgataatggggtacctatagagttttatgctgaagagaaaaaggag
tctatgcttataatagaatctttaatgcttttggctaatagtgaaatagcaaaaaagtta
aaagactatgagggtgtgatataccgctatcatggtgctcctgataattatagatttaat
aattttaagatattagcacataataaaggctatgaattaaaaaagttagatgaagataat
tatgatttaattgattttttagaaaagataaaagggaagtcagaagagaaacttcttact
ggtgttttaatgcgttctatgacaccatcatcatatagtgtaattaataaaagtcatttc
ggtttgggttttgattattatacttattttacttcgcctataagaaggtatgttgattta
acaatacatagaatagtaaaagattatattatagacaaaaaaacatatactaatgatgat
aacaaatataagagtgtagcagatgaatgtactttgcttgacagaacatcaaaaaaagca
gagagaaatttaagacaaataaaagcggcaaggtatatgaaagataggcttggagatgaa
tattacggctttattagtttgctttcaagaaacggtattacagttgagatagaggggctt
gatatagaaggttttattgaggcaacttatgttggtgcgaattatagattttatgatgat
atgcaaagtatttatattgataaagttaagatgtatgaacttggggacagggttaagatt
tttgttgtaaaagcgaatatagaaacaggaaagatatatttttctctttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system