KEGG   Burkholderia pseudomallei NCTC 13179: BBK_1945
Entry
BBK_1945          CDS       T02894                                 
Name
(GenBank) RNB domain protein
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
bpk  Burkholderia pseudomallei NCTC 13179
Brite
KEGG Orthology (KO) [BR:bpk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bpk03016]
    BBK_1945
Enzymes [BR:bpk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     BBK_1945
Transfer RNA biogenesis [BR:bpk03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BBK_1945
SSDB
Motif
Pfam: RNB
Other DBs
NCBI-ProteinID: AGZ27548
Position
1:2240829..2242907
AA seq 692 aa
MNVFFEESGSFKAGSVLSRQGDAFQVELPGGRRAKVRAKDVLIEFEKPAAGELMQQADEA
AQQIDLDFLWECAPAEEFAYAALADEYFGASYGPVERAALVLRLHGAPVYFRRKGRGQYQ
RAPEEQLKMALAGLERKRQQALVQAGYEEELKAGRLPDAFAGKALGLLTKPDKNSIEYKA
LDAAALARGVSPARLMLDCGGIPSARALHEARFLAEYFPHGTGFPAVAVGKLPEDLPRAD
VNAFSIDDITTTEIDDAFSVEHLSDGRVRIGVHIAAPALGIVRGDAVDAIARARLSTVYM
PGDKITMLPDDVVDVFTLKEGDYRPALSLYIIVKRDTQEIVANETRAEYVYVKSNLRHNT
LDELVTEDALAAGTGDYPHKDDIAALWPLAQALFERRQVARAGYGLKREVQRNTDYNFYV
EGEHVSITPRRRGSPLDLIVSELAILANSTWGAFLHDHSVPGIYRTQRAFGMPSGPKRTR
MQTSAAPHEGLGVPQYAWSTSPLRRYVDLVNQWQLLACVQHGVTAKLAAPFKQKDADLYA
VVQGFDDTYAAYADHQRRMEYFWCLRWIKQEGRKQVSATVVKGELVRLDEVPLLLHVPAL
GVHARGTRVLLDVMSVDELTIEASVRLVSVLDAPMVSSGEPADEDEDADAADETLLDAAD
ESAQGEAEALAEAGGAASGNGESSANGEEQSK
NT seq 2079 nt   +upstreamnt  +downstreamnt
gtgaacgttttcttcgaggaatcgggcagtttcaaggcgggcagcgtgctgtcgcgccag
ggcgacgcgtttcaggtcgaattgccgggcggccggcgcgcgaaggtgcgcgcgaaggac
gtgctgatcgaattcgagaagcccgcggcgggcgagctgatgcagcaggcggacgaagcc
gcccaacagatcgatctggatttcctgtgggagtgcgcgcccgccgaggaattcgcgtat
gccgcgctcgccgacgaatatttcggcgcgagctacggccccgtcgagcgcgcggcgctc
gtgctgcgcctgcatggggcgcccgtctacttccgccgcaaggggcgcggccagtatcag
cgcgcgcccgaggagcagctgaaaatggcgctggccgggctcgagcgcaagcgccagcag
gcgctcgtgcaagccggctacgaggaggagctgaaggcgggcaggctgcccgacgcgttc
gcgggcaaggcgctcggcctgctgacgaagccggacaagaactcgatcgaatacaaggcg
ctcgatgcggcggcgctcgcgcgcggcgtgtcgccggcgcgcctgatgctcgactgcggc
ggcattccgtcggcgcgcgcgctgcacgaggcgcgctttctcgcggaatacttcccgcac
ggcacgggctttccggccgtcgcggtcggcaagctgcccgaggacctgccgcgcgcggac
gtcaacgcgttttcgatcgacgacatcacgacgaccgaaatcgacgacgcgttctccgtc
gagcacctgtccgacgggcgcgtgcggatcggcgtgcacatcgcggcgcccgcgctcggc
atcgtgcgcggcgatgcggtcgacgcgatcgcgcgcgcgcggctgtcgaccgtctacatg
ccgggcgacaagatcacgatgctgccggacgacgtcgtcgacgtgttcacgctgaaggag
ggcgattaccgcccggcgctgtcgctgtacatcatcgtcaagcgcgacacgcaggaaatc
gtcgcgaacgagacgcgcgccgaatacgtctatgtgaagagcaacctgcggcacaacacg
ctcgacgagctcgtcaccgaggacgcactcgcggcgggcacgggcgattatccgcacaag
gacgacatcgcggcgctctggccgctcgcgcaggcgctcttcgagcgacgccaggtcgcg
cgcgcgggctacgggctcaagcgcgaagtgcagcgcaacaccgattacaacttctacgtc
gaaggcgagcacgtgtcgatcacgccgcgccggcgcggctcgccgctcgatctcatcgtg
tccgagctcgcgatcctcgcgaactcgacatggggcgcgttcctgcacgatcacagcgtg
ccgggcatttaccgcacgcagcgcgcgttcggcatgccgagcgggccgaagcgcacgcgc
atgcagacgagcgccgcgccgcacgaggggctcggcgtgccgcagtacgcgtggagcacg
tcgccgctgcgccgctacgtcgacctcgtcaaccagtggcaactgctcgcgtgcgtgcag
cacggcgtcaccgcgaagctcgccgccccgttcaagcagaaggatgcggatctgtacgcg
gtcgtgcagggtttcgacgacacgtacgccgcgtacgccgaccaccagcgccggatggag
tatttctggtgcctgcgctggatcaagcaggaaggccgcaagcaggtgagcgcgaccgtc
gtgaagggcgagctcgtgcgcctcgacgaagtgccgctgctgctgcacgtgcccgcgctc
ggcgtgcatgcgcgcggcacgcgggtgctgctcgacgtgatgtcggtcgacgagctgacg
atcgaggcgtcggtacggctcgtgagcgtgctcgatgcgccgatggtgtcgagcggcgag
ccggccgacgaagacgaggacgccgacgcggccgacgagacgctgctcgacgccgccgac
gaatcggcgcaaggcgaagcggaagcgctcgccgaggcgggcggcgcggcgagcggcaac
ggcgaatcgtccgcgaacggcgaggaacaatcgaaatga

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