KEGG   Burkholderia pseudomallei NCTC 13179: BBK_5190
Entry
BBK_5190          CDS       T02894                                 
Symbol
uvrA
Name
(GenBank) uvra: excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
bpk  Burkholderia pseudomallei NCTC 13179
Pathway
bpk03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bpk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BBK_5190 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpk03400]
    BBK_5190 (uvrA)
DNA repair and recombination proteins [BR:bpk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BBK_5190 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BBK_5190 (uvrA)
SSDB
Motif
Pfam: ABC_tran UvrA_inter AAA_29 AAA_21 SMC_N AAA_16 nSTAND1 AAA_22 AAA_33 RsgA_GTPase NACHT Viral_helicase1 AAA_18 AAA_23 UvrA_DNA-bind ATPase AAA_30 DnaJ_CXXCXGXG DUF4350 RNA12
Other DBs
NCBI-ProteinID: AGZ31894
Position
2:2066112..2072027
AA seq 1971 aa
MSSSNLIRIRGARQHNLKHIDLDLRTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETF
SAYARQFLDRMDRPQVERVDGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLYARAAE
LFDRRTARLVRHDTPETIYADLFARTQAHDPRIAITFAVELPENASDEEVEQWLSASGYT
RVQARRDVASPTGPRKVLDVVADRFRLHQIDKARAIEAIEASLKRGGGRVSIYVLAQAPE
GADGGAAQSQVWRYSTGLHDPDSDLRYADPQAALFSFNSAYGACETCRGFGRVIGVDLGL
VISDARKTLRGGAVKPMQTPAWKECQDDLMRYAAKANIRRDTPWAELTPAEQDWVINGSP
DWNGKWQSQWYGVKRFFGYLESKAYKMHIRVLLSKYRSYTPCAVCGGARLKTEALLWRLG
TKANADAVLASADRFMPRGVDWTRAQLEALPGLTVHDLMLLPIERIRRFFDDISLPSALL
DDALKLLLAEVRTRLKYLCDVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLTKTLFVL
DEPSIGLHPRDLNRIVEAMRRLRDAGNTLVVVEHDPSVMLAADRLIDMGPGPGERGGTIV
YDGTPGAIRSARTLTGEYLGGRKHVAHASNWARRPVDARTPRIVLEGASEHNLRDVTVEI
PLQRLVCVTGVSGSGKSTLLQDVLYPAMARHFGKATESPGAYRRLAGAEQVGDVVFVDQS
PIGKTTRSNPASYVGAFDEIRKLFAKAPLALQRGYSAGTFSFNSGDGRCPSCGGSGFEHI
EMQFLSDVYLRCPDCDGSRYRAEILEVRIERGGRALSVADVLDLTVSEAAACFAADADVL
RVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAESAKARDGRRVVTEEARVARAR
LFMFDEPTTGLHFDDIAKLMQAFGKLLASGHSLIVIEHNLDVIRAADWLIDLGPEGGDGG
GLVLCAGTPDDVKACAGSHTGAALLQYERAMNVGADADASGDAGVPLQAALNAARARRAI
EGENVVRIVNAREHNLKALDVDIPHCKFNVVTGVSGSGKSTLAFDILFHEGQRRYLESLN
AYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLLYVKLGLQ
HCIHDGTPVTSQTVESIAAQLLRDHRGEHVGLLAPLVVNRKGVYTDLAKWAKARGNTHLR
VDGEFVTVDPWPKLDRFREHTIELPVADLVVSPDNEAELRQRLDETLELGKGVMHLLAPL
DGLRHAMDNRLCTAGVGAIKVLSVKRACPVCGTSYPELDPRMFSYNSKHGWCTTCVGTGL
ALTREQRAAYDDTVLAEDGRGREQTLPSDEQEPEGVGDEPCPDCGGTRLNPSARAVTFGR
HSIVDVAQWTVTDTRRWIEGLQLAGRDAQIARDIVGEIGSRLAFLEEVGLGYLSLDRAAP
SLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLSALRKLGDKGNTLVVVE
HDEDTIRRADHIIDIGPGAGRRGGTLVAQGGVADLSAQSASVTGRLLAQPMTHPLQPRRS
VNPPGKRNGHAVPQAWLTVHRARLHNLRDVTVGIPLARLVAVTGVSGSGKSTLARDVLMT
NLLDAVGRSVLSSPAARRARKAAQQDAPRAAKSRASVLARSAPRPVLNVTHAWQGCESIS
GWEHIDRVLEVDQTPIGKTPRSCPATYIGVWDAIRRLFADTLEARARGYTASRFSFNTGE
GRCPACEGQGVRTIGMSFLPDVKVPCDVCHGQRFNPETLAVTWRGRNIGDVLTMEIDEAV
EFFAPLSNIAHPLQLMKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDVTRRGQK
APHTLYVLDEPTVGLHMADVAKLIRVLHRLVDAGHSVVVIEHDLDVIAEADWIVDLGPEG
GAGGGTIVAAAPPEGLVEVSASHTGRALGAVLARTGADRDEPLRSGTARAG
NT seq 5916 nt   +upstreamnt  +downstreamnt
ttgtcatccagcaatctgatccgcattcgcggagcacgtcagcacaatctcaagcatatc
gatctcgacctgcgcaccggcgaaatgacggtcgtcaccggcccgtcgggctccggcaag
tcgagcctcgtgttcgacaccctgtacgcggagggccagcggcgctacgtcgagaccttc
agcgcgtatgcgcggcagtttctcgaccggatggaccgcccgcaggtggagcgcgtcgac
ggcgtaccgcccgcgatcgcgatcgaccagacgaaccccgtgcgcagctcgcgctcgacc
gtcggcacgatgaccgagctcaacgatcatctgaagctcctgtacgcgcgcgcggccgag
ctgttcgatcgccggaccgcgcggctggtgcggcacgacacgccggagacgatctatgcg
gatctcttcgcgcgcacgcaggcgcacgacccgcgcatcgcgatcacgttcgccgtcgaa
ctgccggaaaacgcgtccgacgaggaagtcgagcagtggctgtcggcgagcggctatacg
cgcgtgcaggcgcggcgcgacgtcgcgtcgcccaccgggccgcgcaaggtgctcgacgtg
gtggccgaccgcttccggctgcatcagatcgacaaggcacgcgcgatcgaggcgatcgag
gcgtcgctcaagcgcggcggcgggcgggtgagcatctatgtgctcgcgcaggcgccggaa
ggcgcggacggcggcgcggcacagtctcaggtgtggcgttactccaccgggcttcatgac
ccggacagcgatctgcgctacgcggatccgcaggcggcgctgttctccttcaactcggcg
tacggcgcgtgcgagacgtgccgcggcttcggccgcgtgatcggcgtcgatctcggcctc
gtgatttccgacgcgcgcaagacgctgcgcggcggcgccgtcaagccgatgcagacgccc
gcgtggaaggagtgccaggacgacctgatgcgctatgcggcgaaagcgaacatccggcgc
gatacgccgtgggcggagctcacgcccgccgagcaggactgggtgatcaacggctcgccg
gactggaacggcaaatggcagagccagtggtacggcgtgaagcgcttcttcggctatctc
gaatcgaaagcgtacaagatgcacatccgcgtgctgctgtcgaaataccgcagctacacg
ccgtgcgcggtgtgcggcggcgcgcgtctgaagacggaggcgctgctgtggcggctcggc
acgaaggcgaacgccgacgcggtgctcgcgagcgccgatcgcttcatgccgcgcggcgtc
gactggacccgcgcgcaactcgaggcgctgccgggcctgacggtgcacgacctgatgctg
ctgccgatcgagcggatccgccgcttcttcgacgacatcagcctgccgagcgcgctgctc
gacgatgcgctgaagctgctgctcgccgaggtgcgcacgcggctgaagtacctgtgcgac
gtggggctcggctacctgacgctcgaccggcagagccgcacgctgtcgggcggcgaggtg
cagcggatcaacctgacgacggcgctcggcacgtcgctcaccaagacgctgttcgtgctc
gacgagccgagcatcgggctgcatccgcgcgacctgaaccggatcgtcgaggcgatgcgg
cgcctgcgcgacgcgggcaatacgctcgtcgtcgtcgagcacgatccgtcggtgatgctc
gcggccgaccggctgatcgacatgggccccggcccgggcgagcgcggcggcacgatcgtc
tacgacggcacgcccggcgcgatccgctcggcccgcacgctgacgggcgagtatctcggc
ggccgcaagcacgtcgcgcacgcgtcgaactgggcgcgccggccggtggacgcgcgcacg
ccgcgcatcgtgctcgagggcgcgagcgagcacaatctgcgcgacgtcacggtcgagatt
ccgttgcagcgcctcgtatgcgtgacgggcgtgtcgggttccggcaaatcgacgctgctg
caggacgtgctctatccggcgatggcgcggcacttcggcaaggccaccgaatcgccgggc
gcgtaccgccgcctcgcgggcgcggagcaggtgggcgacgtcgtgttcgtcgaccagtcg
ccgatcggcaagaccacgcgctcgaacccggcgagctatgtcggcgcgttcgacgagatc
cgcaagctgttcgcgaaggcgccgcttgcgctgcagcgcggctacagcgcgggcaccttc
agcttcaactccggcgacggccgctgcccgagctgcggcggctccggcttcgagcacatc
gagatgcagttcctgagcgacgtctacctgcgttgcccggactgcgacggcagccgctac
cgggccgagatcctcgaagtgcggatcgagcgcggcgggcgcgcgctcagcgtcgccgac
gtgctcgatctgaccgtcagcgaggccgcggcgtgtttcgccgccgacgccgacgtgctg
cgcgtgctgcagccgatcgtcgacgtcggcctcgaatacgtgaagctcggccagccggtg
ccgacgctgtccggcggcgaggcgcaacgcctgaagctggcgggctttctcgcggaatcc
gcgaaggcgcgcgacgggcgccgcgtcgtcacggaagaggcgcgcgtcgcgcgggcgcgg
ctcttcatgttcgacgagcccaccaccgggctgcatttcgacgacatcgcgaagctgatg
caggcgttcggcaagctgctcgcgagcggccattcgctgatcgtgatcgagcacaatctc
gacgtgatccgcgcggccgactggctgatcgatctcggcccggaaggcggcgacggcggc
ggcctcgtgctgtgcgcgggcacgcccgacgacgtgaaggcctgcgccggctcgcatacg
ggcgcggcgctgctgcagtacgagcgcgcgatgaacgtcggggccgacgccgacgcatcc
ggcgacgcgggcgtgccgctgcaggccgcgctgaacgcggcgcgcgcgcgccgcgcgatc
gaaggcgagaacgtggtgcggatcgtcaatgcgcgcgagcacaacctgaaggcgctcgac
gtcgacattccgcactgcaagttcaacgtggtgaccggcgtgtccggctccggcaagtcg
acgctcgcgttcgacatcctcttccacgagggccagcgccgctacctcgaatcgctgaac
gcgtacgcgcgctcgatcgtgcagccggccgggcgccccgaagtcgacgcggtgtacggc
attccgccgacggtggcgatcgagcagcggctgtcgcgcggcggccgcaagagcacggtc
gcgacgacctccgaagtgtggcatttcctgcggctgctgtacgtgaagctcggccttcag
cattgcatccacgacggcacgccggtgacgtcgcaaaccgtcgaatcgatcgccgcgcag
ttgctgcgcgatcatcgcggcgagcacgtcgggctgctcgcgccgctcgtcgtcaatcgc
aagggcgtgtacacggatctcgcgaagtgggcgaaggcgcgcggcaacacgcacctgcgc
gtcgacggcgaattcgtgacggtggacccgtggccgaagctcgaccgcttccgcgagcac
acgatcgagctgccggtggccgacctcgtcgtgtcgccggacaacgaggccgagttgagg
cagcgcctggacgagacgctcgagctcggcaagggcgtgatgcatctgctcgcgccgctc
gacgggctgcgccatgcgatggacaaccgcctttgcaccgccggcgtcggcgcgatcaag
gtgctgtcggtcaagcgcgcatgcccggtgtgcggcacgagctacccggagctggacccg
cggatgttctcgtacaacagcaagcatggctggtgcacgacctgcgtgggcaccggcctc
gcgctcacgcgcgagcagcgcgcggcctacgacgacacggtgcttgccgaggacggccgc
ggccgcgagcagacgctgccttccgacgagcaggagccggagggcgtcggtgacgagccg
tgcccggattgcggcggcacgcggctgaacccgtccgcgcgcgcggtgactttcggccgc
cattcgatcgtcgacgtcgcgcaatggaccgtgacggatacgcgccgctggatcgagggc
ctgcagctcgccgggcgggacgcgcagatcgcgcgcgacatcgtcggcgaaatcggcagc
cgtctcgcgtttctcgaggaagtcgggctcggctatctgagcctcgatcgcgcggcgccg
agcctgtcgggcggcgaagcccagcgcatccggctcgcggcgcagctcggcagcaacctg
cagggcgtgtgctacgtgctcgacgagccgacgatcggcctgcatccgcgcgacaaccag
atcctgctgagcgcgctgcgcaagctcggcgacaagggcaacacgctcgtcgtcgtcgag
cacgacgaagacacgattcgccgcgccgatcacatcatcgacatcggcccgggcgccggc
aggcgcggcggcacgctggtcgcgcagggcggggtcgcggacctgtccgcgcagtcggcc
tcggtgacggggcgcttgctcgcgcagccgatgacgcatccgctgcagccgcggcgcagc
gtgaatccgccgggcaagaggaacgggcacgcggtgccgcaagcgtggctgacggtgcat
cgcgcccggctgcacaacctgcgcgacgtcacggtcggcattccgcttgcgcggctcgtc
gccgtgacgggcgtgagcggctcgggcaagtcgacgctcgcgcgcgatgtgctgatgacg
aacctgctcgacgcggtgggccgctcggtgctgtcgtcgccggccgcgcggcgcgcacgc
aaggccgcgcagcaggacgcgccgcgggcggcgaagagccgcgcgagcgtgctcgcgcgc
agcgccccgaggcccgtgctgaacgtcacgcatgcgtggcaaggctgcgagtcgatcagc
ggctgggagcatatcgaccgcgtgctcgaagtcgaccagacgccgatcggcaagacgccg
cgctcgtgcccggcgacctacatcggcgtgtgggacgcgatccgcaggctgttcgcggac
acgctggaggcgcgcgcgcgcggctacacggcgtcgcgtttctcgttcaacaccggcgaa
gggcgttgccccgcatgcgaagggcaaggcgtgcgcacgatcggcatgagcttcctgccc
gacgtgaaagtgccgtgcgacgtgtgccacgggcagcgtttcaacccggagacgctcgcg
gtgacgtggcgcggccggaacatcggcgacgtgctgacgatggagatcgacgaagcggtg
gagttcttcgcgccgttgtcgaacatcgcgcatccgctgcaactgatgaaggacgtcggc
ctcggttatctgacgctcggccagccgtcgccgacgctgtccggcggcgaggcgcagcgc
atcaagctcgtcaccgagctgagcaaggtgcgcgacgatgtcacgcggcgcggccagaaa
gcgccgcatacgctgtacgtgctcgacgagccgaccgtgggcctgcacatggccgacgtc
gcgaagctgattcgcgtgctgcaccggctcgtcgacgcggggcacagtgtcgtcgtgatc
gagcacgacctcgatgtgatcgcggaggcggactggatcgtcgatctcggcccggagggc
ggtgcgggcggcggcacgatcgtggcggccgcgcctccggaagggctcgtggaggtgagc
gcaagccatacggggcgcgcgctcggggccgtgctggcgcgaacgggcgcggaccgggac
gaaccgctgcgaagcgggacggcgcgcgccggttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (20)   
   Pfam (20)   
All databases (27)   

Download RDF
DBGET integrated database retrieval system