KEGG   Burkholderia pseudomallei 1106a: BURPS1106A_0004
Entry
BURPS1106A_0004   CDS       T00480                                 
Symbol
hupA
Name
(GenBank) DNA-binding protein HU-alpha
  KO
K03530  DNA-binding protein HU-beta
Organism
bpl  Burkholderia pseudomallei 1106a
Brite
KEGG Orthology (KO) [BR:bpl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpl03032]
    BURPS1106A_0004 (hupA)
   03036 Chromosome and associated proteins [BR:bpl03036]
    BURPS1106A_0004 (hupA)
   03400 DNA repair and recombination proteins [BR:bpl03400]
    BURPS1106A_0004 (hupA)
DNA replication proteins [BR:bpl03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BURPS1106A_0004 (hupA)
Chromosome and associated proteins [BR:bpl03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BURPS1106A_0004 (hupA)
DNA repair and recombination proteins [BR:bpl03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BURPS1106A_0004 (hupA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_2 DUF2267 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: ABN91107
UniProt: A3NPL8
Position
I:5488..5766
AA seq 92 aa
MNKQELIDAVAAQTGASKAQTGETLDTLLEVIKKAVSKGDSVQLIGFGSFGSGKRAARTG
RNPKTGETIKIPAAKTVKFTAGKAFKDAVNKR
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaaacaggaactgatcgacgccgtcgccgcccagacgggcgccagcaaggctcaa
accggcgaaacgctggacacgctcctcgaagtgatcaagaaggctgtgtcgaaaggcgac
tcagttcaactgatcggcttcggcagcttcggctcgggcaagcgcgcagcgcgcaccggc
cgcaaccccaagacgggcgagaccatcaagatcccggcagccaagacggtcaagttcacg
gctggcaaggcgttcaaggacgcagtgaacaagcgctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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