KEGG   Burkholderia pseudomallei 1106a: BURPS1106A_A1413
Entry
BURPS1106A_A1413  CDS       T00480                                 
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
bpl  Burkholderia pseudomallei 1106a
Brite
KEGG Orthology (KO) [BR:bpl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpl03021]
    BURPS1106A_A1413
Transcription machinery [BR:bpl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BURPS1106A_A1413
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 DUF134 HTH_23 HTH_30 Sigma70_ECF
Other DBs
NCBI-ProteinID: ABN95294
UniProt: A3P537
Position
II:1378635..1379156
AA seq 173 aa
MSFESDVVGWLPQLRRYARALTGDPAWADDLVQDTVERAFSRMRAFRPDSNLRAWLLTIL
RHLYIDQLRARREFAVDDDEGPWRTLEAPAGQIDALVLRDVQRMLYRLPLEQREVLLLVC
VEELSYQDASAVLGVPVGTVMSRLSRARERMRALLTDAPLRPPLSLTAARHHR
NT seq 522 nt   +upstreamnt  +downstreamnt
gtgagcttcgaatcggacgtcgtcggctggctgccgcagttgcgccgctatgcgcgcgcg
ctgacgggcgaccccgcgtgggccgacgatctcgtacaggacaccgtcgagcgcgcgttc
tcgcgcatgcgcgcgttccgtcccgacagcaatctgcgcgcgtggctgttgacgatcctg
cgccatctgtacatcgatcagttgcgcgcgcgccgcgaattcgccgtcgacgacgacgaa
ggcccgtggcgcacgctcgaggcgcccgccggccagatcgacgcgctcgtgctgcgcgac
gtgcagcgaatgctgtaccggctgccgctcgagcagcgcgaagtgctgctgctcgtctgc
gtcgaggaattgagctatcaggacgcgtcggcggtgctcggcgtgccggtcggcaccgtg
atgtcgcggctgtcgcgcgcgcgggagcgcatgcgcgcgctgctgaccgacgcgccgctg
cggccgccgctgtcccttaccgctgcgagacatcatcgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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