KEGG   Candidatus Blochmannia pennsylvanicus: BPEN_114
Entry
BPEN_114          CDS       T00272                                 
Symbol
holD
Name
(GenBank) DNA polymerase III, psi subunit
  KO
K02344  DNA polymerase III subunit psi [EC:2.7.7.7]
Organism
bpn  Candidatus Blochmannia pennsylvanicus
Pathway
bpn03030  DNA replication
bpn03430  Mismatch repair
bpn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BPEN_114 (holD)
   03430 Mismatch repair
    BPEN_114 (holD)
   03440 Homologous recombination
    BPEN_114 (holD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpn03032]
    BPEN_114 (holD)
   03400 DNA repair and recombination proteins [BR:bpn03400]
    BPEN_114 (holD)
Enzymes [BR:bpn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BPEN_114 (holD)
DNA replication proteins [BR:bpn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BPEN_114 (holD)
DNA repair and recombination proteins [BR:bpn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BPEN_114 (holD)
SSDB
Motif
Pfam: DNA_III_psi
Other DBs
NCBI-ProteinID: AAZ40754
UniProt: Q493T1
Position
134912..135334
AA seq 140 aa
MLTNNRNKPHTFIFQELGITLWKLRYPVVLDSINPIKLWPSLRLVLISPDVPISLNDPFI
KDVIRAMQINPREVCALTTNQIKILIIPSEFSYYCWWIGTKVSNNLNSICLTTPALSILK
CDIHAKRDLWRQISDIRLNI
NT seq 423 nt   +upstreamnt  +downstreamnt
atgcttactaataatagaaataaaccacatacgtttatttttcaggaattaggtattaca
ctttggaaattacgatatcctgtagttttagacagcataaacccgattaagttatggcca
tctcttcgtttagtattaatatcaccggatgttccgatatcattaaatgatccttttatt
aaagatgttatacgtgccatgcagattaaccctagagaagtatgcgcgttgaccactaac
caaattaaaattttaattattccatcagagttttcttattattgttggtggattggtact
aaagtatcaaataatttgaatagtatatgtctaactactcctgcgttgtcaatattaaaa
tgtgatattcacgcaaagcgtgatttatggcgacaaattagtgatattagactgaatatt
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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