KEGG   Candidatus Blochmannia pennsylvanicus: BPEN_319
Entry
BPEN_319          CDS       T00272                                 
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
bpn  Candidatus Blochmannia pennsylvanicus
Pathway
bpn03030  DNA replication
bpn03430  Mismatch repair
bpn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BPEN_319 (holA)
   03430 Mismatch repair
    BPEN_319 (holA)
   03440 Homologous recombination
    BPEN_319 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpn03032]
    BPEN_319 (holA)
   03400 DNA repair and recombination proteins [BR:bpn03400]
    BPEN_319 (holA)
Enzymes [BR:bpn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BPEN_319 (holA)
DNA replication proteins [BR:bpn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BPEN_319 (holA)
DNA repair and recombination proteins [BR:bpn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BPEN_319 (holA)
SSDB
Motif
Pfam: DNA_pol3_delta DNA_pol3_delt_C
Other DBs
NCBI-ProteinID: AAZ40949
UniProt: Q492Z5
Position
complement(378161..379189)
AA seq 342 aa
MIWIYPEQLCIELKKELRSVYVLLGNDSYFLGDSYLNIVNTARMLNFNESVNIALDMYSD
WENICNLFRVSSLFEKRRILSLKFPQNYPVAILKKKVPLLFSFLHDDLVLILYIHESNQI
NKNNIWLQCFKKIGIFVDCSTPTHTRLIMWIENQAKNMKLVIENLACQLLCYYYEGNLTL
LNQTLRNLSLIYPDGNLNFIRVKKIVTDSACFNMNHWIESILTGNKQRADRILKKLEYIG
VDLELLLCRIKSEILMITNMKYNMVQGKSLFNLLKKYKIYRKYHCMLLARAVNRLSLYQL
YQAIELLAQIELIYKKDYIVLSRSSFELLSLILCYDKKVSLK
NT seq 1029 nt   +upstreamnt  +downstreamnt
atgatttggatatacccagaacaattgtgtatagaattgaaaaaggaattgagatctgtt
tatgtattattagggaatgattcttattttttaggagatagttatctaaatattgttaat
acagccagaatgctaaatttcaatgaatctgttaatatagcattggatatgtattctgat
tgggagaatatatgtaatttgttcagagtatcaagtttatttgaaaaacgcagaatatta
tcactgaaatttcctcaaaattatcctgttgctattttaaaaaaaaaagtgcctttattg
ttctcatttcttcatgatgatttagtattaattttatatattcatgaatcgaatcaaatt
aataaaaataatatttggttacaatgttttaaaaaaataggaatattcgttgattgcagc
actcctacgcatacacgcttgataatgtggatagaaaatcaagctaaaaatatgaaactt
gttatagaaaatttagcttgtcaattattatgttattattatgaaggtaatttaacatta
ttaaatcaaacgttgcggaatctgtctttaatctatcctgatggaaatttaaattttatt
cgtgtaaaaaaaatagtaactgattcagcatgttttaatatgaatcattggatagaatcg
attttaacgggcaacaaacaacgtgctgatcgtattctaaaaaaattggaatatataggt
gtcgatttagaactattattatgcaggattaaatctgaaatactgatgataactaacatg
aaatacaatatggtgcaaggaaaatcattatttaatttgttaaaaaaatataaaatatat
agaaagtatcattgtatgttgttagctagagctgttaatcggttaagtttataccaatta
tatcaagcaatagaattattagcgcaaatagaattaatatataaaaaggattatattgtt
ttgtcacgatcaagttttgaactattatcactcatcttatgttacgataagaaggtttcg
cttaaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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