KEGG   Burkholderia pseudomallei BPC006: BPC006_I2886
Entry
BPC006_I2886      CDS       T02301                                 
Name
(GenBank) RNA polymerase sigma factor RpoE
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
bpq  Burkholderia pseudomallei BPC006
Brite
KEGG Orthology (KO) [BR:bpq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpq03021]
    BPC006_I2886
Transcription machinery [BR:bpq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BPC006_I2886
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 Cpta_toxin HTH_16 DUF134 HTH_24
Other DBs
NCBI-ProteinID: AFR16741
Position
I:complement(2831166..2832344)
AA seq 392 aa
MTEPFHAASAGTQHVVLRASACLRVACALFVPAVGAALYACAAPLVGGGGAAALAGLAAA
LVALRARAACVRHQPAALLIDAGAGVLAAFDRDGRRLARGQIAGCTQWSDLLVVLRVQGR
GRRVTPLVIPADAVDAAVFRALCVLGRRAARGALAAAWRPRGRPLPVENAHERLERERYN
SAPRCFPRLRICQVSEKEIDQVLVERVQNGDKAAFELLVSKYHRKIIRLISRLVRDPAEV
EDVAQDAFIKAYRALPQFRGESAFYTWLYRIAVNTAKNYLATQGRRAPTSTDADAEEAET
FSDADQLRDINTPESMLMSKQIAQTVNAAMALLPEELRTAITLREIEGLSYEEIAEMMGC
PIGTVRSRIFRAREAIAAKLRPLLDTPEGRRW
NT seq 1179 nt   +upstreamnt  +downstreamnt
ttgacggagccgttccatgccgcatcggcaggcacgcagcacgtcgtgctgcgcgcgtcg
gcgtgcctgcgcgtcgcgtgcgcgctgttcgtgccggccgtcggcgcggcgctctatgcg
tgcgccgcgccgctcgtcggcggcggcggggcggcggcactcgcggggctcgccgcggcg
ctcgtcgcgctgcgtgcgcgggccgcgtgcgtgcggcatcagccggcggcgttgctgatc
gacgccggcgcgggcgtgctcgcggcgttcgatcgcgatgggcggcgcctcgcgcgcggg
cagatcgccggctgcacgcaatggagcgatctgcttgtcgtgctgagggtgcagggccgc
ggccggcgcgtgacgccgctcgtcattccggccgatgcggtcgacgcggccgtgttccgc
gcgctctgcgtgctgggccggcgggccgcgcgcggggcgctcgcggcggcatggcgcccg
cgcggcaggccgcttccggtcgaaaacgcccatgagcgcctcgagcgggaacgttacaat
agcgctccgcgttgcttccctcgtttacggatttgtcaggtgagtgaaaaagaaatcgat
caggtactggtcgaacgcgtacagaatggcgacaaggcggcgttcgaactcctggtctcc
aaataccaccgcaagatcatccggctgatctcgcgcctcgtgcgggatcccgcggaggtc
gaggacgtggcccaggacgcgttcatcaaggcgtatcgcgcgttgccgcagtttcgcggc
gagtcggcgttctacacgtggttgtaccggattgccgtcaatacggcgaagaactacctt
gcgacccaggggcgccgggcgcccacgtccaccgacgcggacgccgaagaggctgaaact
ttctccgacgcggaccaactaagggatatcaacacgcctgagtcgatgttgatgagcaag
cagatcgcccaaacggtcaacgccgcgatggcgctgttgccggaagagttgcgaacggcc
atcacgctgcgcgagatcgaaggtctgagctacgaagagatcgcggagatgatgggttgc
ccgatcggcaccgtccgctcgcggatctttcgcgcccgcgaggcgatcgcggcaaaattg
cggccgctgctcgatacgccggaaggcaggcgctggtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (15)   

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