KEGG   Anaerostipes hadrus: CL2_21710
Entry
CL2_21710         CDS       T02612                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
bprl  Anaerostipes hadrus
Pathway
bprl03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:bprl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CL2_21710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bprl03021]
    CL2_21710
   03400 DNA repair and recombination proteins [BR:bprl03400]
    CL2_21710
Enzymes [BR:bprl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CL2_21710
Transcription machinery [BR:bprl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CL2_21710
DNA repair and recombination proteins [BR:bprl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CL2_21710
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid Apocytochr_F_C
Other DBs
NCBI-ProteinID: CBL39040
UniProt: D4MUH4
Position
2151908..2155507
AA seq 1199 aa
MMESSNEYQSNKISFDAIKIGLASPEKIREWSRGEVKKPETINYRTLKPEKDGLFCEKIF
GPTKDWECHCGKYKKVRYKGVVCDRCGVEVTKASVRRERMGHIELAAPVSHIWYFKGIPS
RMGLILDISPRTLEKVLYFACYIVLDAGDTDLAYKQVLTEKEYREAYEKYGDTFRVGMGA
EAVKELLQAIDLEAEAKSLQDEFKTATGQKRARIVKRLEVVEAFLNSDNKPEWMILDAVP
VIPPDIRPMVQLDGGRFATSDLNDLYRRIINRNNRLKRLLELGAPDIIVRNEKRMLQEAV
DALIDNGRRGRPVTGPGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPDLKI
YQCGLPKEMAIELFKPFVMKELVERKLAHNIKSAKKMVEKLQPEVWDVLEDVIKEHPVML
NRAPTLHRLGIQAFEPILVEGKAIRLHPLVCTAYNADFDGDQMAVHLPLSVEAQAECRFL
LLSPNNLLKPSDGGPVAVPSQDMVLGIYYLTLEKDGDKGEGKYFKSENEAYLAYENKVIT
LHSKIKVRRTGVDKDGNPISQIVDCTLGRILFNEIILQDLGFVDRSKPENALAYEIDFHV
GKKQLKQILDRCINIHGATKTAEVLDDIKAIGYKFSTRGALTVSISDMTVPPEKPQILGD
AQKQVEFITEQYKRGLMTEEERYKAVVKTWFDADDVLTDKLISGLDRLNNIFMMADSGAR
GSNQQIKQLAGMRGLMADTSGRTIELPIKSNFREGLDVLEYFISAHGARKGLSDTALRTA
DSGYLTRRLVDVSQDLIIREQDCCEGTGEEIPGMYVEAFMDGQEVIESLEERITGRYAAE
ELVNKETGEVIVKANHMITPKRAKAVCDAGYTSVKIRTMLTCKSGVGACAKCYGSNMATG
QAVQVGEAVGIIAAQSIGEPGTQLTMRTFHAGGVAGDDITQGLPRVEELFEARKPKGLAI
IAEFGGEVQLKDTKKKREVIITNRETGDVKTYLIPYGSRLKVQEGQILEAGDELTEGSIN
PHDLLRIKGIRAVQDYMIREVQRVYRLQGVDINDKHVEVIVRQMLKKVRIEDGGDTGYLP
GAMVDVLELEKRNKEMEEQGLQTAIADQIMLGITKASLATDSFLSAASFQETTKVLTDAA
IKGKVDPLVGLKENVILGKLIPAGTGMRRYRDVKISTDENDFTIGDEIDFEDEEFDIEE
NT seq 3600 nt   +upstreamnt  +downstreamnt
atgatggaatcaagcaatgaatatcaaagcaataaaatttcatttgatgcaattaagatc
gggttggcttccccagaaaagatccgtgagtggtctagaggagaagtaaagaaacctgag
acgattaactatcgaacattaaaacctgaaaaagacgggcttttctgtgagaagatcttc
gggcctacaaaggactgggagtgtcactgcggaaagtacaaaaaagttcgctataaaggt
gttgtctgcgaccgatgcggtgttgaagtgacaaaagcaagtgtccgtcgtgaaagaatg
ggacatatcgaattagcagctccagtatctcatatctggtattttaaaggaattcctagc
cgtatgggtctgattcttgatatttcaccaagaacactggaaaaggttttatatttcgca
tgctatatcgttttagatgctggagatacagatcttgcatataaacaggtattaactgaa
aaagaatatagagaagcgtatgaaaaatacggagatacattccgcgtaggaatgggtgct
gaagcagtgaaagaactgcttcaggccattgatcttgaggcagaagcaaaatccttacag
gatgaattcaaaactgctacaggtcagaagagagccagaatcgttaagagactggaagtt
gtagaggcatttttaaactcagacaacaaaccagaatggatgatcctggatgcagttcca
gttattccaccagatatccgtccaatggtgcagttagatggtggacgttttgccacatct
gacttaaatgacctttacagacgtatcattaacagaaataaccgtctgaagagattatta
gagcttggagctccagatatcatcgtaagaaacgaaaagagaatgttacaggaagcagtt
gatgccctgatcgataatggtagacgtggacgtccagtcacaggaccaggaaaccgtgca
ttaaaatcattatcagatatgttaaaaggtaaacagggacgtttccgtcagaacctgtta
ggaaaacgtgtagactattctggacgttccgttatcgtagtaggaccagacttaaagatt
tatcagtgtggtcttccaaaagaaatggcgatcgaattattcaagccattcgttatgaaa
gaattagtagagcgtaaattagctcacaacattaaatcagctaagaaaatggttgaaaaa
cttcagccagaagtatgggatgtcttagaagacgtcattaaagaacatcctgttatgtta
aaccgtgcaccgacactgcatagactgggaattcaggcattcgagcctatcctggtagag
ggtaaagcgattcgtctgcacccattggtatgtacagcgtataatgccgacttcgacggt
gaccagatggctgtccatcttccattatctgtggaagcacaggcagagtgtagattcctt
ctgttatcaccaaacaacctgttaaaaccatctgatggtggtccagtagctgttccttct
caggatatggtacttggtatctactatctgacattagagaaagatggagacaaaggtgaa
ggtaaatacttcaaatctgagaacgaagcatacttagcttatgaaaataaggtaatcaca
cttcattctaagatcaaagtaagacgtacaggtgtggacaaagatggaaatcctatttcc
cagatcgtagattgtacacttggacgtattctgtttaatgagatcatcttacaggattta
ggatttgtagacagaagcaaaccagaaaatgccttagcatatgagattgatttccatgta
ggaaagaaacagttaaaacagatccttgacagatgtatcaatattcatggagcaacaaag
actgcagaagtcttagatgatattaaagcaatcggatacaaattctctacaagaggagct
ttaacagtatccatttctgatatgacagtgccacctgagaaacctcagatcttaggagat
gcacagaaacaggtagaatttatcacagaacagtataaacgtggtctgatgactgaagaa
gagcgttataaagctgttgttaagacatggttcgatgccgatgacgttttaacagataaa
ctgatcagcggattagaccgattaaacaacatcttcatgatggccgattccggagcccgt
ggttctaaccagcagatcaaacagttagcaggtatgcgtggactgatggccgatacatca
ggacgtacaattgaattaccaatcaagtctaacttccgtgaaggtcttgacgtactggaa
tactttatttcagcacatggtgctcgtaaaggtctgtctgatacagcccttcgtacagcc
gattcaggatacttaacacgtcgtctggtagacgtatcacaggatctgatcattcgtgaa
caggactgctgtgaaggtacaggagaagaaattccaggaatgtatgtagaagcattcatg
gatggacaggaagttatcgaaagcttagaagaacgtatcacaggaagatacgcagcagaa
gagcttgtgaataaagaaactggagaagtcattgtaaaagcaaaccacatgatcacacca
aaacgtgcgaaagccgtttgtgatgcaggatatacatctgttaagatccgtacgatgtta
acatgtaaatccggagttggagcttgtgcgaagtgttatggatctaacatggcaacaggt
caggccgtacaggttggagaagctgtcggaatcatcgcagcacagtcaatcggtgagcca
ggtacacagcttacaatgagaacattccatgccggtggagtagccggtgatgatatcaca
cagggtcttcctcgtgtcgaagagttatttgaagcacgtaaaccaaaaggacttgcgatc
atcgcagaatttggtggagaagtgcagttaaaagatacaaagaagaaacgtgaagttatc
atcacaaacagagaaactggcgatgtgaagacatatctgatcccttacggatctcgtctg
aaagtacaggaaggacagatccttgaagccggagatgaacttacagaaggttctatcaac
cctcacgatttattaagaatcaagggaatccgtgcagtacaggattacatgatccgcgaa
gtacagagagtataccgtttacagggtgtagatatcaacgacaagcacgttgaggttatc
gtacgtcagatgcttaagaaagtacgtatcgaagacggtggagacacaggatacttacca
ggagcaatggttgatgtattagaacttgagaagagaaacaaagagatggaagaacagggt
cttcagactgcaatagcagatcagatcatgcttggtatcacaaaagcatctctggcaaca
gattccttcttatcagcagcttccttccaggagacaacaaaagttcttacagatgcagca
atcaaaggaaaagtcgatccattagtaggattaaaagaaaacgtaatccttggtaaattg
atcccagctggaacaggtatgagacgttacagagatgtcaagatcagcacagatgaaaat
gatttcacgatcggagatgaaatcgatttcgaggatgaagaatttgatatcgaagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (56)   

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