KEGG   Butyrate-producing bacterium SS3/4: CK3_04480
Entry
CK3_04480         CDS       T02611                                 
Name
(GenBank) DNA polymerase III catalytic subunit, DnaE type
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
bprs  Butyrate-producing bacterium SS3/4
Pathway
bprs03030  DNA replication
bprs03430  Mismatch repair
bprs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bprs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CK3_04480
   03430 Mismatch repair
    CK3_04480
   03440 Homologous recombination
    CK3_04480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bprs03032]
    CK3_04480
   03400 DNA repair and recombination proteins [BR:bprs03400]
    CK3_04480
Enzymes [BR:bprs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CK3_04480
DNA replication proteins [BR:bprs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CK3_04480
DNA repair and recombination proteins [BR:bprs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CK3_04480
SSDB
Motif
Pfam: DNA_pol3_alpha PHP DNA_pol3_finger HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: CBL40281
UniProt: D7GR56
Position
complement(470495..473974)
AA seq 1159 aa
MAFTHLHVHTEYSLLDGSSKIGELAARAKELGMDSMAITDHGVMYGVIDFYRAARAAGVK
PIIGCEVYVSPGSRFDRETVHGEDRYYHLVLLAENNTGYQNLMKIVSKGFVDGFYYKPRI
DEEVMREYHEGIIALSACLAGEVPRYLEKGLYEDAKAAAKRHLEIFGEGNYFLELQDHGI
PMQRQVNQGIMRLSKELNIPLVATNDCHYINAEDWEAHDILLCIQTGKKVSDENRMRYEG
GQYYVKSEEEMRRLFPYAPEAIENTHKIAERCNVEIEFGVTKLPRFDVPEGYDSWGYLNH
LCDEGFAMRYPNDDGTLRARLDYELGTIKSMGYVDYFLIVWDFINFAKSHGIAVGPGRGS
AAGSIVAYCLKITDIDPIRYQLLFERFLNPERVSMPDIDVDFCYERRQEVIDYVVEKYGK
DQVAQIVTFGTLAARGVIRDVGRVMDLPYSLCDQVSKMVPAELNITLDLALRKNPELKAL
YDSDEQVRKLIDMSKRLEGLPRHTSMHAAGVVISRTSIDEYVPLSRGADGTIVTQFTMTT
LEELGLLKMDFLGLRTLTVIQDAVKMIKKDHGVDLDLEHIDYDDKKVMDSLGTGKNEGVF
QLESGGFKTFMKELKPTTLEDIIAGISLYRPGPMDFIPKYLKGKNDPESITYTCPQLEPI
LKPTYGCIVYQEQVMQIVRDLAGYTLGRSDLVRRAMSKKKAAVMAKERQNFVYGNEEEGV
KGCIANGIDEKTANQIYDDMTDFAKYAFNKSHAAAYAVVAYQTAFLKYYYPKEFMAALMT
SVMDNTTKVSEYILACRNMGIPILPPDINEGYSGFSVSGNGIRYGLSAIKSVGRAVVDVI
IAERESGGLFKNLDDFVSRMSNKEVNKRTLESFIKSGALDTLPGTRKQKLIVSGDLLESK
SKEKKTVMEGQMSFFDIAPEEEKDNFHITFPDVGEYDKQTLLAFEKETIGIYVSGHPMEE
YRELWEKNVTARTSDFVVDEVGKTIVEDNSNVVIGGMITSKKVKTTKTNQLMAFITVEDL
VGTVEVLVFPKIYEKNRQAFTEENKVFIRGRASIGDDPVGKLICEEVIPFTDIPNELWLQ
FENQAFYASHIDDVMAALRDSDGKDRVIMYLKEERKMRRLSENWAVLAGPDLLNRLYKIL
GEKNVKVVQKVIEKKGKVY
NT seq 3480 nt   +upstreamnt  +downstreamnt
atggcatttacacacttgcatgtccatacagagtacagtcttttggacggatccagtaaa
atcggagagttggcggcgcgggcaaaagagcttggcatggacagcatggcgatcaccgat
cacggtgtcatgtatggggtgatcgatttttaccgggcagcccgtgcggccggggtcaaa
ccgatcatcggctgcgaggtgtatgtctccccgggttcaagatttgaccgtgagactgtc
cacggcgaggaccgctactaccacctggtcctcctcgcggaaaacaatacaggataccag
aacctgatgaagatcgtctccaagggctttgtggacggcttctactataaaccgaggatc
gatgaggaggtcatgcgggagtaccacgagggaatcatcgccttaagcgcctgccttgcc
ggtgaagtcccgagatacctggaaaaaggtctctacgaggacgcgaaggcggctgcaaaa
cgccatctggagatcttcggcgagggcaattatttccttgaacttcaggatcatgggatt
ccgatgcagcgccaggtaaatcaggggatcatgcgcctctcaaaagaattaaatatcccg
cttgtggcgacaaacgactgtcactacatcaacgccgaggactgggaggcccacgacatc
ctgctctgtatccagacagggaaaaaggtctccgacgagaaccgtatgcgctacgagggc
ggacagtactatgtgaagtccgaggaggagatgcgcagactcttcccatacgccccggaa
gccatcgagaacacccacaagatcgcggagcgctgcaacgtggagatcgagtttggtgtc
acaaaacttccgagattcgatgtgccggagggctacgattcctggggctatttaaaccac
ctctgcgatgagggcttcgcgatgcgctatccgaatgatgacggaacgctccgcgcccgc
ctggattatgaactcggaaccatcaagagcatgggctacgtggactacttcctgatcgtg
tgggatttcatcaacttcgcgaaatcccatgggatcgctgtgggaccggggcgggggtct
gcggcgggaagtatcgtggcgtactgcttaaaaatcacagatatcgatccgatccggtac
cagctcctctttgagcgtttcctgaacccggaacgagtatccatgcccgatatcgacgtg
gatttctgctacgagcgccgtcaggaagttatcgactacgttgtggaaaagtacgggaag
gaccaggtggcccagatcgtcactttcggtaccctggcggcccgcggcgtgatccgcgat
gtggggcgcgtcatggacctgccctacagcctctgcgaccaggtatcgaagatggtcccg
gcggaattaaatatcacgttggacctggcactcaggaaaaacccggaattaaaggcgcta
tatgattcagatgagcaggtaagaaagctcatcgacatgtcaaagcgcctggaaggactc
ccgcgccacacctccatgcatgcggccggtgtcgtgatctcaagaacttccatcgacgag
tatgtcccgctgtcaaggggagccgacggcaccatcgtgacccagtttacgatgacgact
ctggaagagcttgggctgttaaagatggactttttgggactccggaccctcaccgtgatt
caggacgcggtgaagatgatcaaaaaagatcacggtgtggacctcgatctggagcacatt
gattatgatgacaaaaaggtcatggattctctcggaacgggaaagaacgagggcgtgttc
cagttagaaagcggcggcttcaagaccttcatgaaggaattgaagccgactaccctggag
gatatcatagccggaatctccctgtaccgtccgggtccaatggactttattccgaaatat
ttaaagggaaagaatgacccggaatccatcacctacacctgcccgcagctggagccgatc
ttaaagccgacctacggctgtatcgtctaccaggagcaggtcatgcagatcgtccgagat
ctcgccggatataccctcggccgaagcgaccttgtgcgccgtgccatgtcgaagaaaaag
gcggcggtcatggcgaaggagcgccagaactttgtttacggaaatgaggaagagggcgta
aagggctgtatcgccaacgggatcgacgagaagacggcaaaccagatttacgatgacatg
acggacttcgcaaagtacgccttcaacaagtcccatgcggcggcctatgcggtggttgca
taccagaccgcgtttttaaaatattattatccaaaggaattcatggcggcgctcatgacc
tccgtgatggacaacaccacgaaggtctccgagtacattctcgcctgccggaacatggga
atcccgatcctgccgccggatatcaacgagggatacagcggcttctccgtatccggaaac
ggtatccgttacggactttccgccatcaagagtgtgggccgggccgtggtggacgtgatc
atcgccgagcgtgagagcggcggtctcttcaaaaacctcgatgattttgtgtccagaatg
tccaacaaggaagtcaataagagaacgctggagagcttcattaaatctggtgccctggac
acacttccgggaacgagaaagcagaagcttatcgtttccggcgaccttctggagagcaag
tcaaaagagaaaaagacggtcatggaaggccagatgagcttctttgacatcgccccggag
gaggaaaaggacaacttccatatcacgttcccggatgtgggcgagtatgacaagcagaca
cttctggcattcgagaaggagaccatcggcatctatgtcagcggtcatccgatggaggaa
taccgggaactctgggagaaaaatgtgacggcgagaacttccgatttcgttgtggatgag
gtcggaaagaccattgtggaggataattccaatgtggtcatcggtggaatgatcacgtcg
aaaaaggtgaagactacaaagacgaaccagctcatggcattcatcaccgttgaggatctt
gtgggaacggtggaagttctcgtgttcccgaagatctacgagaagaaccgtcaggcgttc
accgaggaaaacaaggtgtttatccgcggccgggcgtccatcggtgatgacccggtagga
aagctgatctgcgaggaagtgatcccgttcaccgatatcccgaatgagctttggcttcag
ttcgaaaatcaggcattctacgcgagccacatcgacgatgtcatggcggcactccgtgat
tccgacggaaaagaccgggtcattatgtatttaaaagaagaacggaaaatgcgcagactt
tccgaaaactgggcagtcctcgcagggccggatcttctaaaccgcctgtataagatcctt
ggtgaaaaaaatgtcaaagttgtgcaaaaggtcattgaaaagaagggcaaagtgtattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (206)   
   KEGG ORTHOLOGY (1)   
   RefGene (203)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (221)   

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