KEGG T02611: CK3

Butyrate-producing bacterium SS3/4: CK3_06460

Entry

CK3_06460         CDS       T02611

Name

(GenBank) DNA gyrase subunit B

K02470

DNA gyrase subunit B [EC:5.6.2.2]

Organism

bprs Butyrate-producing bacterium SS3/4

Brite

KEGG Orthology (KO) [BR:bprs00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bprs03032]
    CK3_06460
   03400 DNA repair and recombination proteins [BR:bprs03400]
    CK3_06460
Enzymes [BR:bprs01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     CK3_06460
DNA replication proteins [BR:bprs03032]
Prokaryotic type
  DNA Topoisomerases
   CK3_06460
DNA repair and recombination proteins [BR:bprs03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CK3_06460

SSDB

Motif

Pfam:

DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c TOPRIM_C HATPase_c_3 UMPH-1

Other DBs

NCBI-ProteinID:

CBL40439

UniProt:

D7GRL4

Position

complement(665837..667747)

AA seq 636 aa
MSAEYNADQIQILEGLEAVRKRPGMYIGSTSSRGLHHLVYEIVDNAVDEALAGYCDTIDV
QINSDNSITVVDDGRGIPVDIQKKAGLPAVEVVFTILHAGGKFGGGGYKVSGGLHGVGAS
VVNALSEWLEVEVYHGGKVYKQRYERGKTMYPLKIVGDCPSDKHGTKVTFLPDKTIFEET
VYDYDTLKIRLRETAFLTKNLKIILRDDREDKKEKVFHYEGGIKEFVTYLNRSNVPLYDN
VIYCEGKKDNVLVEVAMQHNDSYTENIYSFVNNINTPEGGTHLTGFRNALTKTFNDYGRK
NKLLKDNEPALTGEDIREGLTAIISVKIEEPQFEGQTKQKLGNSEARGAVDSVVSEQLTY
FLEQNPSVAKTIIEKSVLAQRARAAARKARDLTRRKTVLDGLSLPGKLADCSSKHPEECE
IYIVEGDSAGGSAKDARNKSTQAILPLRGKILNVEKARLDRIYGNAEIKSMITAFGTGIH
EDFDISKLRYHKIIIMTDADVDGAHISTLLLTFIYRFMPELIKQGYVYLAQPPLYKIEKN
KRVWYAYSDEELNNILKEIGRDQNNKIQRYKGLGEMDAEQLWETTMDPEHRVLLRVTMNE
EMTSEIDLTFTTLMGDQVEPRREFIEQNAKYGTLDI

NT seq 1911 nt +upstreamnt +downstreamnt
atgagcgcagaatataatgcagatcaaatccagattctggagggacttgaggctgtaaga
aaaagaccgggaatgtacattggaagtacgtcttcgaggggacttcaccatctggtatat
gagatcgtagacaatgcggtggacgaggctcttgcaggatactgcgataccatcgatgta
cagattaattccgacaattccatcaccgttgtcgatgacggacggggaattccggtcgat
atccagaaaaaagcgggacttcctgcggtcgaagtggtctttacgatccttcatgccggc
ggtaagttcggcggtgggggatacaaggtatccggcggcttgcacggtgtaggagcttct
gttgtaaacgccttatccgagtggctggaggtcgaagtctaccacggaggaaaggtctac
aagcagcgctatgagcgcggaaagaccatgtacccgttaaagatcgtgggtgactgcccg
tcagataaacatggtacaaaagtaacgttccttccggacaagaccatctttgaggagacc
gtctatgactatgataccttaaagatccgtctccgcgagacggcgttccttacaaagaat
ttaaagatcattctcagagatgaccgcgaggacaagaaggaaaaagtcttccactatgaa
ggcggtatcaaggagtttgtcacctacttaaaccgcagtaacgtgccgctttacgacaat
gtgatctactgcgagggcaagaaggacaacgtgctggttgaggttgccatgcagcacaat
gattcttataccgagaatatttacagctttgtaaataatatcaatacaccggaaggcgga
acgcacctcaccggtttcagaaatgccttaacaaagacattcaacgattacggaagaaag
aataagctcttaaaggacaatgagccggctcttaccggcgaggatatccgtgagggctta
acagccatcatcagcgtcaagatcgaggaaccacagtttgaaggccagacaaagcagaaa
cttggaaatagtgaggcgagaggtgctgtggacagcgttgtttctgagcagctcacctat
ttccttgagcagaatccgtctgtcgctaaaacgatcattgaaaaatcggttcttgcccag
agagcgcgtgccgctgcgagaaaggcgagagatttaacaagaagaaagacggtccttgac
ggcttatccttacccggaaagcttgcggactgctccagtaagcacccggaggaatgcgag
atctacatcgtagagggagattccgccggcggttccgcgaaagatgcgagaaataagagt
acccaggcgatcctgccgcttcgaggaaagatcttaaacgtggagaaggcgagacttgac
cgtatttacggaaacgcggagatcaaatccatgatcacggcgtttggaacgggaatccac
gaggatttcgatatctcgaagctccgctaccacaagatcatcatcatgaccgatgccgat
gtggatggtgcccatatcagcacactgcttctgacattcatctaccggtttatgccggag
cttatcaaacagggctatgtttacctggcccagccgccgctctataagatcgagaagaac
aagcgggtatggtatgcgtacagtgatgaggagctaaacaatatcttaaaagagatcgga
cgtgaccagaacaacaagatccagcgttacaaaggtcttggtgagatggatgcggaacag
ctctgggagaccaccatggatccggagcacagagtccttttacgcgtgaccatgaacgag
gagatgacatcggagatcgaccttaccttcacgacactcatgggcgatcaggtagaaccg
cggcgtgaatttatcgagcagaacgcaaagtacggaactcttgacatttaa

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (78)   
   KEGG ORTHOLOGY (1)   
   RefGene (75)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (92)   

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