KEGG   Butyrate-producing bacterium SS3/4: CK3_09500
Entry
CK3_09500         CDS       T02611                                 
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
bprs  Butyrate-producing bacterium SS3/4
Pathway
bprs03030  DNA replication
bprs03430  Mismatch repair
bprs03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bprs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CK3_09500
   03430 Mismatch repair
    CK3_09500
   03440 Homologous recombination
    CK3_09500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bprs03032]
    CK3_09500
   03400 DNA repair and recombination proteins [BR:bprs03400]
    CK3_09500
Enzymes [BR:bprs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CK3_09500
DNA replication proteins [BR:bprs03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CK3_09500
DNA repair and recombination proteins [BR:bprs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CK3_09500
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C RNase_H_2 ATC_hydrolase DUF1572
Other DBs
NCBI-ProteinID: CBL40706
UniProt: D7GSC6
Position
961163..961906
AA seq 247 aa
MADEMINSYVALDLETTGIGARHEKITEIGMVKVIDGETTDTYHTMVNPHREIPKRIVEL
TGITDDMVKDAPGIEEILDEVLAFTEDLPLLGHQIIFDYGFLVQAAVNQKRKFEKYGVDT
LKLCRYLMPGEEKKNLSAACAYFEVTQDTAHRALSDAYAAHNLYQELKKRFGKERPELFT
AKMLQYKAKKERTASKRQKEHLQDLLKYHRIDITVEIDHMSGNEISRMIDKIIFQYGRIP
ENAKKQG
NT seq 744 nt   +upstreamnt  +downstreamnt
atggcagatgaaatgataaattcttatgtcgccctggatcttgagacgacgggcatcggt
gcccgtcacgaaaagatcacggagatcggcatggtgaaggtgatcgacggtgagacgacg
gacacttaccacactatggtaaatccgcaccgggagatcccgaagcggatcgtggagctg
acggggatcactgatgatatggtgaaggatgcaccgggaatcgaggagatcctggatgag
gtcctggccttcaccgaagacctcccgcttctcggccaccagatcatttttgactacggc
ttcctcgtacaggccgcagtgaaccagaaacggaaattcgagaaatacggggtcgataca
ctgaaactctgccggtatctgatgccgggggaggaaaagaagaatctgagtgccgcctgc
gcgtactttgaggttacccaggatacggcacaccgggcactttccgatgcctatgccgcc
cacaatctataccaggaactgaaaaaaaggtttggcaaagaacgtccggaactcttcact
gccaaaatgctccaatataaggcaaaaaaggaacggacggcgtcgaaaaggcaaaaagaa
cacttgcaggatttactaaaatatcatagaatagacataactgtcgagatcgatcacatg
tccggaaatgagatatcccggatgatcgacaagattattttccagtatggaagaatcccg
gaaaatgcgaaaaaacagggatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (55)   

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