KEGG   Burkholderia pseudomallei K96243: BPSL1283
Entry
BPSL1283          CDS       T00203                                 
Name
(GenBank) putative exodeoxyribonuclease V beta chain
  KO
K03582  exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
Organism
bps  Burkholderia pseudomallei K96243
Pathway
bps03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    BPSL1283
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bps03400]
    BPSL1283
Enzymes [BR:bps01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     BPSL1283
DNA repair and recombination proteins [BR:bps03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     BPSL1283
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C PDDEXK_1 UvrD_C_2 DUF374
Other DBs
NCBI-ProteinID: CAH35277
UniProt: Q63VG2
Position
1:1490354..1494166
AA seq 1270 aa
MSHVAPSGPSASELDVFACPLDGVNQIEASAGTGKTWNICALYVRLLLEKDLGADEILVV
TFTKAATAELHERIRARLAQLAHALDTGDDGGDPFIARLFETTLAPERGLDPQTAAKRVR
RALRAFDQAAIHTIHAFCQRALQEAPFAAAMPFAFEMEADDGALRFELAADFWRTRVEPV
AAAYPAFAEWLVEYGAGPAALDAQLARRLKKPLARLRWDGLHAADDGAESAARAHFDTAA
AIWRDERGVLGTLLADAQPSLNQRSHKPEAVSEALDAWARYFEQASAVAALPRAALKLTQ
SALEKATKKGGATPRHAFFDVAQALEAAVAALEAAQRARWLSLVEQWLDAAPAELAQRKR
TRRVVSFDDLLANLYRALDAHPWLRETLRARYPAALIDEFQDTDPLQFAIFDTIFAPAGP
LFLVGDPKQAIYSFRAADLHTYLAARARASARYTLAVNQRSTPAIVGACNRVFGANPRAF
VLDGLDYEPVRAGSRVRAPLVDATDPLAGAGDFRIWTLPAGDDVLTKRDAQRHAAHACAA
EIARLMRGARERAVTLGGEPLAASGIAVLVQTHRQGSLVKRVLAAWGIGSVELAQASVFA
TIDAEQLERVLAAIDAPGDLRRLRSALASDWFGLDAAALWRLEQGDAEQDGIDAAARGAS
GNGGGARAASAGAPAPSPADADAMGWVERFSRYRLLWRERGFAVMWRTLAGELRIAERLM
AGADGERRVTDVNHLAELTQARASAQPGIAPTLRWLAAQRLEGGGDDAQLRLESDRNLVQ
IVTVHKSKGLEYAIVFCPFLNDGGLREPAGSGLPDAREYHDESGCAVLHYGCDDEAAERA
SREAVREQAAERARLVYVALTRAVYRCYLVAGTYQSSRSTKEARRSVLNWLVAGAGRDFD
AWLKEPPEDAELAERWQALAGGPVTLGALPVPAHREPLAAGHDAQATRAARRATRGLRDA
WRIASFSSLASAIARDESGIARAADDEMRPDHDALAAALGADALEPPDAAAAIAPAPAAA
PRELAEDDILAFPRGAAAGECLHRLLELSNFADASTWPPAALRALHERPVEAELALAERL
PAMMTRLVADLAATELVPGMRLAALDPARRLTEMEFLFPAPALDFNALRRLLAAHGYPDV
ALEAGTLAGFVKGFIDMIVEHDGRFWIVDWKSNHLGTTPEAYGERALDAAMAHHAYHLQA
LLYMVALHRYLRVRMHGYDYDAHIAGYLYVFVRGVRPDWRNGGASAGVHARRPARALIEA
LDALMREGDA
NT seq 3813 nt   +upstreamnt  +downstreamnt
atgagtcacgtcgcgccatccggcccgtcggcgagcgagctcgacgtgttcgcgtgtccg
ctcgacggtgtgaaccagatcgaggcgtccgcgggcaccggcaagacctggaacatctgc
gcgctgtacgtgcgcctgctgctcgaaaaggatctcggcgcggacgagattctcgtcgtc
acgttcacgaaggcggcgacggccgagctgcacgaacggattcgcgcgcgcctcgcgcag
ctcgcgcacgcgctcgacacgggcgacgacggcggcgatccgttcatcgcgcgcctgttc
gagacgacgctcgcgcccgagcgcgggctcgatccgcaaacggcggcgaagcgcgtgcgt
cgcgcgctgcgcgcattcgaccaggcggcgatccacacgatccacgcgttctgccagcgg
gcgctgcaggaagcgccgttcgcggcggcgatgccgttcgcgttcgagatggaagcggac
gacggcgcgctgcgcttcgagctggccgccgatttctggcgcacgcgtgtcgagcccgtc
gcggcggcctatccggcgttcgccgagtggctcgtcgagtacggcgcggggccggcggcg
ctcgacgcgcagctcgcgcggcggctgaagaagccgctggcgcgattgcgctgggacggc
ttgcacgcggccgacgacggcgcggaaagcgccgcgcgcgcgcacttcgatacggcggcc
gcgatctggcgcgacgagcgcggcgtgctcggcacgctgctcgccgacgcgcagccgtcg
ttgaaccagcgctcgcacaagccggaggcggtgagcgaggcgctcgacgcgtgggcgcgt
tatttcgagcaggcgagtgcggtggccgcgttgccgcgcgcggcgctcaagctcacgcag
tccgcgctcgagaaagcgacgaaaaagggcggcgcgacgccgcgccacgcgttcttcgac
gtcgcgcaggcgctcgaggcggctgtcgccgcgctcgaggccgcgcagcgcgcgcgctgg
ctgtcgctcgtcgagcaatggctcgacgcggcgcccgccgagctcgcgcagcgcaagcgc
acgcgccgcgtcgtatcgttcgacgatctgctcgcgaacctgtatcgcgcgctcgacgcg
catccgtggttgcgcgagacgctgcgcgcgcgctatccggccgcgctcatcgacgaattc
caggatacggacccgctgcagttcgcgatcttcgatacgatcttcgcgcccgccggcccg
ctctttctcgtcggcgatccgaagcaggcgatctacagcttccgcgcggcggacctgcac
acgtatctcgccgcgcgcgcgcgggcgtccgcgcgctacacgctcgcggtgaaccagcgc
tcgacgcccgcgatcgtcggtgcgtgcaaccgcgtgttcggcgcgaacccgcgcgcgttc
gtgctcgacgggctcgattacgaaccggtgcgcgcgggctcgcgcgtgcgcgcgccgctt
gtcgacgcgaccgatccgcttgccggcgcgggcgacttccgcatatggacgctgcccgcc
ggcgacgacgtgctgaccaagcgcgacgcgcagcggcacgccgcgcatgcatgcgcggcg
gaaatcgcgcggctgatgcggggcgcgcgcgagcgcgcggtgacgctcggcggcgagccg
ctcgcggcgtccggcatcgcggtgctcgtgcagacgcaccggcagggcagtctcgtgaag
cgcgtgctggccgcatggggtatcggcagcgtcgagctcgcccaggcgtcggtattcgca
acgatcgatgccgagcagctcgagcgcgtgctggccgccatcgacgcgccgggcgacctg
cggcgcctgcgctcggcgctcgcgtccgactggttcgggctcgatgcggcggcgctctgg
cgcctcgagcagggcgatgccgagcaggacggcatcgacgccgccgcccgcggcgcgagc
ggcaacggcggcggcgcgcgcgccgcatcggcgggcgcgcccgcgccgtcgcccgcggac
gccgatgcgatgggctgggtcgagcgcttctcgcgctaccggctgctgtggcgcgagcgc
ggcttcgcggtgatgtggcgcacgctcgccggcgagctgcgcatcgccgagcggctgatg
gcgggggcggacggcgagcggcgcgtgaccgacgtcaatcacctcgccgagctgacgcag
gcgcgtgcgtccgcgcagccgggcatcgcgccgacgctgcgctggcttgccgcgcagcgc
ctcgaaggcggtggggacgacgcgcagttgcggctcgaatccgaccgtaacctcgtgcag
atcgtcaccgttcacaagtcgaaggggctcgaatacgcgatcgtgttctgtccgttcctg
aacgacggcgggctgcgcgagccggccggctccggcctgcccgacgcgcgcgagtaccac
gacgaatcgggctgcgcggtgctgcattacggctgcgacgacgaagcggccgagcgcgcg
tcgcgcgaggcggtgcgcgagcaggcggccgagcgcgcgcggctcgtctacgtcgcgctc
acgcgcgccgtctatcggtgctatctggtcgcgggcacctatcagtcgtcgcgttcgacg
aaggaggcgcggcgcagcgtgctgaactggcttgtcgcgggcgcgggccgcgatttcgat
gcgtggctgaaggagccgcccgaagacgcggagctcgccgagcgctggcaggcgctcgcg
ggcggcccggtgacgctcggcgcgctgccggtgcccgcgcatcgcgagccgctcgcggcc
gggcacgatgcgcaggcgacgcgagccgcgcgacgtgcgacgcgtggcttgcgcgacgca
tggcggatcgcgagcttcagctcgctcgcatcggcgatcgcgcgcgatgagagcggcatc
gcgcgcgcggccgacgacgagatgcgccccgatcatgacgcgcttgccgccgcgctcggc
gcggacgcgctcgagccgccggacgcggccgccgcgatcgcgccggcgcccgccgccgcg
ccgcgcgagctcgccgaagacgacatcctcgcgttcccgcgcggcgcggcggcgggcgaa
tgcctgcaccggctgctcgagctgagcaatttcgccgatgcgtcgacgtggccgcccgcc
gcgctgcgcgcgctgcacgagcgcccggtcgaggcggagctcgcgctggccgagcggctg
cccgcgatgatgacgcggctcgtcgccgatctcgcggcgacggagctcgtgccgggcatg
cgcctcgcggcactcgatccggcgcggcggctcacggaaatggagttcctgtttcccgcg
cccgcgctcgatttcaacgcattgcggcgcttgctcgccgcgcacggctatccggacgtc
gcgctcgaagcgggcacgctggccggattcgtcaaaggattcattgacatgatcgtcgag
cacgacggccgcttctggatcgtcgactggaaatcgaatcatctcggcacgacgcccgaa
gcatacggcgagcgggcgctcgacgccgcgatggcgcatcacgcgtatcacctgcaggcg
ctgctctatatggtcgcgctgcatcgctatctgcgcgtgcgcatgcatggctacgactac
gacgcgcacatcgcgggctatctgtacgtgttcgtgcgcggcgtgcgtcccgattggcga
aatggcggcgcgagcgccggcgtgcatgcgcggcggcccgcacgcgcgctgatcgaggcg
ctcgacgcgctgatgcgcgagggggatgcatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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