KEGG   Burkholderia pseudomallei K96243: BPSL1885A
Entry
BPSL1885A         CDS       T00203                                 
Name
(GenBank) Hfq protein
  KO
K03666  host factor-I protein
Organism
bps  Burkholderia pseudomallei K96243
Pathway
bps02024  Quorum sensing
bps03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BPSL1885A
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BPSL1885A
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bps03019]
    BPSL1885A
   03036 Chromosome and associated proteins [BR:bps03036]
    BPSL1885A
Messenger RNA biogenesis [BR:bps03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BPSL1885A
Chromosome and associated proteins [BR:bps03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BPSL1885A
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: CAH35885
UniProt: Q63TT1
Position
1:2246186..2246836
AA seq 216 aa
MANPAESHPQNDFINAARKERKRVEIYLVNGIRLTGCIESFDQYLVMLRTPVGLQGIYKR
AISTIQLDTGGSRPGGRGPRAGGAHGGGGRPGGREGGGHGPYGSHGGSREPRGDGGGYGA
RESRGDGGYGSRESRGDGGYGSRESRGDGGYGSREPRGDGGYGAREPREPREPRESYGAP
QEGASTPSGTQERNGNGNGPVIVTRRRRSLGPTDGQ
NT seq 651 nt   +upstreamnt  +downstreamnt
atggccaatcctgcagaatcccatccgcaaaacgacttcatcaatgccgcgcgcaaggaa
cgcaagcgcgtcgaaatttatctcgtcaacggtattcgactgacgggttgcatcgagtcg
ttcgaccagtatctggtgatgctgcgcacgcccgtcggcctgcaaggcatctataaacgc
gccatctcgacgatccagctcgacacgggcggctcccgtccgggcggacgcggcccgcgc
gcgggcggcgcccacggcggcggcggacgccccggcggacgcgaaggcggcggtcatggc
ccgtacggctcgcacggcggctcgcgcgaaccccgcggcgacggcggcggctatggcgct
cgcgaatcgcgcggcgacggcggttatggctcccgcgaatcgcgcggtgacggcggttat
ggctcccgcgaatcgcgcggcgacggcggctacggttcccgcgaaccgcgtggcgacggc
ggctatggtgcgcgcgagccgcgtgaaccgcgcgagccccgcgagtcttatggcgcgccg
caagaaggcgcatcgacgccgtccggcacgcaggaacgcaacggcaacggcaacggcccg
gtgatcgtcacgcgccgtcgccgttcgctcggcccgaccgacggccaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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