KEGG   Burkholderia pseudomallei K96243: BPSL1939
Entry
BPSL1939          CDS       T00203                                 
Symbol
ihfA
Name
(GenBank) integration host factor alpha-subunit
  KO
K04764  integration host factor subunit alpha
Organism
bps  Burkholderia pseudomallei K96243
Brite
KEGG Orthology (KO) [BR:bps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bps03032]
    BPSL1939 (ihfA)
   03036 Chromosome and associated proteins [BR:bps03036]
    BPSL1939 (ihfA)
   03400 DNA repair and recombination proteins [BR:bps03400]
    BPSL1939 (ihfA)
DNA replication proteins [BR:bps03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BPSL1939 (ihfA)
Chromosome and associated proteins [BR:bps03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    BPSL1939 (ihfA)
DNA repair and recombination proteins [BR:bps03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      BPSL1939 (ihfA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1 DUF2267 S_100
Other DBs
NCBI-ProteinID: CAH35938
UniProt: Q63TM8
Position
1:complement(2309224..2309571)
AA seq 115 aa
MARDVPASTPAGDTPTLTKAELAELLFDSVGLNKREAKDMVEAFFEVIRDALENGESVKL
SGFGNFQLRDKPQRPGRNPKTGEAIPIAARRVVTFHASQKLKALVENGAEPDLAR
NT seq 348 nt   +upstreamnt  +downstreamnt
atggcccgcgacgtcccggcgtccacgcccgccggcgatacgccgacgctgacgaaggcc
gagctggccgaactgctgttcgacagcgtcggcctcaacaagcgcgaggcgaaggacatg
gtcgaggcgtttttcgaggtgatccgcgatgcgctcgaaaacggcgagagcgtgaagctg
tcgggcttcggcaatttccagctgcgcgacaagccgcagcggccggggcgcaatccgaag
acgggcgaggcgattccgatcgccgcgcgccgtgtcgtgacgttccatgcgagccagaaa
ttgaaggcgctcgtcgaaaacggcgccgagccggatctcgcgcgttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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