KEGG   Burkholderia pseudomallei K96243: BPSS0058
Entry
BPSS0058          CDS       T00203                                 
Symbol
uvrA
Name
(GenBank) putative excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
bps  Burkholderia pseudomallei K96243
Pathway
bps03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:bps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    BPSS0058 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bps03400]
    BPSS0058 (uvrA)
DNA repair and recombination proteins [BR:bps03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BPSS0058 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      BPSS0058 (uvrA)
SSDB
Motif
Pfam: ABC_tran UvrA_inter AAA_29 AAA_21 SMC_N AAA_16 nSTAND1 AAA_33 RsgA_GTPase AAA_22 AAA_25 NACHT Viral_helicase1 AAA_18 AAA_23 UvrA_DNA-bind ATPase AAA_30 DnaJ_CXXCXGXG DUF4350 RNA12
Other DBs
NCBI-ProteinID: CAH37501
UniProt: Q63P87
Position
2:56852..62767
AA seq 1971 aa
MSSSNLIRIRGARQHNLKHIDLDLRTGEMTVVTGPSGSGKSSLVFDTLYAEGQRRYVETF
SAYARQFLDRMDRPQVERVDGVPPAIAIDQTNPVRSSRSTVGTMTELNDHLKLLYARAAE
LFDRRTARLVRHDTPETIYADLFARTQAHDPRIAITFAVELPENASDEEVEQWLSASGYT
RVQARRDVASPTGPRKVLDVVADRFRLHQIDKARAIEAIEASLKRGGGRVSIYVLAQAPE
GADGGAAQSQVWRYSTGLHDPDSDLRYADPQAALFSFNSAYGACETCRGFGRVIGVDLGL
VIPDARKTLRGGAVKPMQTPAWKECQDDLMRYAAKANIRRDTPWAELTPAEQDWVINGSP
DWNGKWQSQWYGVKRFFGYLESKAYKMHIRVLLSKYRSYTPCAVCGGARLKTEALLWRLG
TKANADAVLASADRFMPRGVDWTRAQLEALPGLTVHDLMLLPIERIRRFFDDISLPSALL
DDALKLLLAEVRTRLKYLCDVGLGYLTLDRQSRTLSGGEVQRINLTTALGTSLTKTLFVL
DEPSIGLHPRDLNRIVEAMRRLRDAGNTLVVVEHDPSVMLAADRLIDMGPGPGERGGTIV
YDGTPGAIRSARTLTGEYLGGRKHVAHASNWARRPVDARTPRIVLEGASEHNLRDVTVEI
PLQRLVCVTGVSGSGKSTLLQDVLYPAMARHFGKATESPGAYRRLAGAEQVGDVVFVDQS
PIGKTTRSNPASYVGAFDEIRKLFAKAPLALQRGYSAGTFSFNSGDGRCPSCGGSGFEHI
EMQFLSDVYLRCPDCDGSRYRAEILEVRIERGGRALSVADVLDLTVSEAAACFAADADVL
RVLQPIVDVGLEYVKLGQPVPTLSGGEAQRLKLAGFLAESAKARDGRRVVTEEARVARAR
LFMFDEPTTGLHFDDIAKLMQAFGKLLASGHSLIVIEHNLDVIRAADWLIDLGPEGGDGG
GLVLCAGTPDDVKACAGSHTGAALLQYERAMNVGADADASGDAGVPLQAALNAARARRAI
EGENVVRIVNAREHNLKALDVDIPHGKFNVVTGVSGSGKSTLAFDILFHEGQRRYLESLN
AYARSIVQPAGRPEVDAVYGIPPTVAIEQRLSRGGRKSTVATTSEVWHFLRLLYVKLGLQ
HCIHDGTPVTSQTVESIAAQLLRDHRGEHVGLLAPLVVNRKGVYTDLAKWAKARGNTHLR
VDGEFVTVDPWPKLDRFREHTIELPVADLVVSPDNEAELRQRLDETLELGKGVMHLLAPL
DGLRHAMDNRLCTAGVGAIKVLSVKRACPVCGTSYPELDPRMFSYNSKHGWCTTCVGTGL
ALTREQRAAYDDTVLAEDGRGREQTLPSDEQEPEGVGDEPCPDCGGTRLNPSARAVTFGR
HSIVDVAQWTVTDTRRWIEGLQLAGRDAQIARDIVGEIGSRLAFLEEVGLGYLSLDRAAP
SLSGGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHPRDNQILLSALRKLGDKGNTLVVVE
HDEDTIRRADHIIDIGPGAGKRGGTLVAQGGVADLSAQSASVTGRLLAQPMTHPLQPRRS
VNPPGKRNGHAVPQAWLTVHRARLHNLRDVTVGIPLARLVAVTGVSGSGKSTLARDVLMT
NLLDAVGRSVLSSPAARRARKAAQQDAPRAAKSRASVLARSAPRPVLNVTHAWQGCESIS
GWEHIDRVLEVDQTPIGKTPRSCPATYIGVWDAIRRLFADTLEARARGYTASRFSFNTGE
GRCPACEGQGVRTIGMSFLPDVKVPCDVCHGQRFNPETLAVTWRGRNIGDVLTMEIDEAV
EFFAPLSNIAHPLQLMKDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKVRDDVTRRGQK
APHTLYVLDEPTVGLHMADVAKLIRVLHRLVDAGHSVVVIEHDLDVIAEADWIVDLGPEG
GAGGGTIVAAAPPEGLVEVSASHTGRALGAVLARTGADRDEPLRSGTARAG
NT seq 5916 nt   +upstreamnt  +downstreamnt
ttgtcatccagcaatctgatccgcattcgcggagcacgtcagcacaatctcaagcatatc
gatctcgacctgcgcaccggcgaaatgacggtcgtcaccggcccgtcgggctccggcaag
tcgagcctcgtgttcgacaccctgtacgcggagggccagcggcgctacgtcgagaccttc
agcgcgtatgcgcggcagtttctcgaccggatggaccgcccgcaggtggagcgcgtcgac
ggcgtaccgcccgcgatcgcgatcgaccagacgaaccccgtgcgcagctcgcgctcgacc
gtcggcacgatgaccgagctcaacgatcatctgaagctcctgtacgcgcgcgcggccgag
ctgttcgatcgccggaccgcgcggctggtgcggcacgacacgccggagacgatctatgcg
gatctcttcgcgcgcacgcaggcgcacgacccgcgcatcgcgatcacgttcgccgtcgaa
ctgccggaaaacgcgtccgacgaggaagtcgagcagtggctgtcggcgagcggctatacg
cgcgtgcaggcgcggcgcgacgtcgcgtcgcccaccgggccgcgcaaggtgctcgacgtg
gtggccgaccgcttccggctgcatcagatcgacaaggcccgcgcgatcgaggcgatcgag
gcgtcgctcaagcgcggcggcgggcgggtgagcatctatgtgctcgcgcaggcgccggaa
ggcgcggacggcggcgcggcacagtctcaggtgtggcgttactccaccgggcttcatgac
ccggacagcgatctgcgctacgcggatccgcaggcggcgctgttctccttcaactcggcg
tacggcgcgtgcgagacgtgccgcggcttcggccgcgtgatcggcgtcgatctcggcctc
gtgattcccgacgcgcgcaagacgctgcgcggcggcgccgtcaagccgatgcagacgccc
gcgtggaaggagtgccaggacgacctgatgcgctatgcggcgaaagcgaacatccggcgc
gatacgccgtgggcggagctcacgcccgccgagcaggactgggtgatcaacggctcgccg
gactggaacggcaaatggcagagccagtggtacggcgtgaagcgcttcttcggctatctc
gaatcgaaagcgtacaagatgcacatccgcgtgctgctgtcgaaataccgcagctacacg
ccgtgtgcggtgtgcggcggcgcgcgtctgaagacggaggcgctgctgtggcggctcggc
acgaaggcgaacgccgacgcggtgctcgcgagcgccgatcgcttcatgccgcgcggcgtc
gactggacccgcgcgcagctcgaggcgctgccgggcttgacggtgcacgacctgatgctg
ctgccgatcgagcggatccgccgcttcttcgacgacatcagcctgccgagcgcgctgctc
gacgatgcgctgaagctgctgctcgccgaggtgcgcacgcggctgaagtacctgtgcgac
gtggggctcggctacctgacgctcgaccggcagagccgcacgctgtcgggcggcgaggtg
cagcggatcaacctgacgacggcgctcggcacgtcgctcaccaagacgctgttcgtgctc
gacgagccgagcatcgggctgcatccgcgcgacctgaaccggatcgtcgaggcgatgcgg
cgcctgcgcgacgcgggcaatacgctcgtcgtcgtcgagcacgatccgtcggtgatgctc
gcggccgaccggctgatcgacatgggccccggcccgggcgagcgcggcggcacgatcgtc
tacgacggcacgcccggcgcgatccgctcggcccgcacgctgacgggcgagtatctcggc
ggccgcaagcacgtcgcgcacgcgtcgaactgggcgcgccggccggtggacgcgcgcacg
ccgcgcatcgtgctcgagggcgcgagcgagcacaatctgcgcgacgtcacggtcgagatt
ccgttgcagcgcctcgtatgcgtgacgggcgtgtcgggttccggcaaatcgacgctgctg
caggacgtgctctatccggcgatggcgcggcacttcggcaaggccaccgaatcgccgggc
gcgtaccgccgcctcgcgggcgcggagcaggtgggcgacgtcgtgttcgtcgaccagtcg
ccgatcggcaagaccacgcgctcgaacccggcgagctatgtcggcgcgttcgacgagatc
cgcaagctgttcgcgaaggcgccgcttgcgctgcagcgcggctacagcgcgggcaccttc
agcttcaactccggcgacggccgctgcccgagctgcggcggctccggcttcgagcacatc
gagatgcagttcctgagcgacgtctacctgcgttgcccggactgcgacggcagccgctac
cgggccgagatcctcgaagtgcggatcgagcgcggcgggcgcgcgctcagcgtcgccgac
gtgctcgatctgaccgtcagcgaggccgcggcgtgtttcgccgccgacgccgacgtgctg
cgcgtgctgcagccgatcgtcgacgtcggcctcgaatacgtgaagctcggccagccggtg
ccgacgctgtccggcggcgaggcgcaacgcctgaagctggcgggctttctcgcggaatcc
gcgaaggcgcgcgacgggcgccgcgtcgtcacggaagaggcgcgcgtcgcgcgggcgcgg
ctcttcatgttcgacgagcccaccaccgggctgcatttcgacgacatcgcgaagctgatg
caggcgttcggcaagctgctcgcgagcggccattcgctgatcgtgatcgagcacaatctc
gacgtgatccgcgcggccgactggctgatcgatctcggcccggaaggcggcgacggcggc
ggcctcgtgctgtgcgcgggcacgcccgacgacgtgaaggcctgcgccggctcgcatacg
ggcgcggcgctgctgcagtacgagcgcgcgatgaacgtcggggccgacgccgacgcatcc
ggcgacgcgggcgtgccgctgcaggccgcgctgaacgcggcgcgcgcgcgccgcgcgatc
gaaggcgagaacgtggtgcggatcgtcaatgcgcgcgagcacaacctgaaggcgctcgac
gtcgacattccgcacggcaagttcaacgtggtgaccggcgtgtccggctccggcaagtcg
acgctcgcgttcgacatcctcttccacgagggccagcgccgctacctcgaatcgctgaac
gcgtacgcgcgctcgatcgtgcagccggccgggcgccccgaagtcgacgcggtgtacggc
attccgccgacggtggcgatcgagcagcggctgtcgcgcggcggccgcaagagcacggtc
gcgacgacctccgaagtgtggcatttcctgcggctgctgtacgtgaagctcggccttcag
cattgcatccacgacggcacgccggtgacgtcgcaaaccgtcgaatcgatcgccgcgcag
ttgctgcgcgatcatcgcggcgagcacgtcgggctgctcgcgccgctcgtcgtcaatcgc
aagggcgtgtacacggatctcgcgaagtgggcgaaggcgcgcggcaacacgcacctgcgc
gtcgacggcgaattcgtgacggtggacccgtggccgaagctcgaccgcttccgcgagcac
acgatcgagctgccggtggccgacctcgtcgtgtcgccggacaacgaggccgagttgagg
cagcgcctggacgagacgctcgagctcggcaagggcgtgatgcatctgctcgcgccgctc
gacgggctgcgccatgcgatggacaaccgcctttgcaccgccggcgtcggcgcgatcaag
gtgctgtcggtcaagcgcgcatgcccggtgtgcggcacgagctacccggagctggacccg
cggatgttctcgtacaacagcaagcatggctggtgcacgacctgcgtgggcaccggcctc
gcgctcacgcgcgagcagcgcgcggcctacgacgacacggtgcttgccgaggacggccgc
ggccgcgagcagacgctgccttccgacgagcaggagccggagggcgtcggcgacgagccg
tgcccggattgcggcggcacgcggctgaacccgtccgcgcgcgcggtgactttcggccgc
cattcgatcgtcgacgtcgcgcaatggaccgtgacggatacgcgccgctggatcgagggc
ctgcagctcgccgggcgggacgcgcagatcgcgcgcgacatcgtcggcgaaatcggcagc
cgtctcgcgtttctcgaggaagtcgggctcggctatctgagcctcgatcgcgcggcgccg
agcctgtcgggcggcgaagcccagcgcatccggctcgcggcgcagctcggcagcaacctg
cagggcgtgtgctacgtgctcgacgagccgacgatcggcctgcatccgcgcgacaaccag
atcctgctgagcgcgctgcgcaagctcggcgataagggcaacacgctcgtcgtcgtcgag
cacgacgaagacacgattcgccgcgccgatcacatcatcgacatcggcccgggcgccggc
aagcgcggcggcacgctggtcgcgcagggcggggtcgcggacctgtccgcgcagtcggcc
tcggtgacggggcgcttgctcgcgcagccgatgacgcatccgctgcagccgcggcgcagc
gtgaatccgccgggcaagaggaacgggcacgcggtgccgcaagcgtggctgacggtgcat
cgcgcccggctgcacaacctgcgcgacgtcacggtcggcattccgcttgcgcggctcgtc
gccgtgacgggcgtgagcggctcgggcaagtcgacgctcgcgcgcgatgtgctgatgacg
aacctgctcgacgcggtgggccgctcggtgctgtcgtcgccggccgcgcggcgcgcacgc
aaggccgcgcagcaggacgcgccgcgggcggcgaagagccgcgcgagcgtgctcgcgcgc
agcgccccgaggcccgtgctgaacgtcacgcatgcgtggcaaggctgcgagtcgatcagc
ggctgggagcatatcgaccgcgtgctcgaagtcgaccagacgccgatcggcaagacgccg
cgctcgtgcccggcgacctacatcggcgtgtgggacgcgatccgcaggctgttcgcggac
acgctggaggcgcgcgcgcgcggctacacggcgtcgcgtttctcgttcaacaccggcgaa
gggcgttgccccgcatgcgaagggcaaggcgtgcgcacgatcggcatgagcttcctgccc
gacgtgaaagtgccgtgcgacgtgtgccacgggcagcgtttcaacccggagacgctcgcg
gtgacgtggcgcggccggaacatcggcgacgtgctgacgatggagatcgacgaagcggtg
gagtttttcgcgccgttgtcgaacatcgcgcatccgctgcaactgatgaaggacgtcggc
ctcggttatctgacgctcggccagccgtcgccgacgctgtccggcggcgaggcgcagcgc
atcaagctcgtcaccgagctgagcaaggtgcgcgacgatgtcacgcggcgcggccagaaa
gcgccgcacacgctgtacgtgctcgacgagccgaccgtgggcctgcacatggccgacgtc
gcgaagctgattcgcgtgctgcaccggctcgtcgacgcggggcacagtgtcgtcgtgatc
gagcacgacctcgatgtgatcgcggaggcggactggatcgtcgatctcggcccggagggc
ggtgcgggcggcggcacgatcgtggcggccgcgcctccggaagggctcgtggaggtgagc
gcaagccatacggggcgcgcgctcggagccgtgctggcgcgaacgggcgcggaccgggac
gaaccgctgcgaagcgggacggcgcgcgccggttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (29)   

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