KEGG   Burkholderia pseudomallei K96243: BPSS0078
Entry
BPSS0078          CDS       T00203                                 
Name
(GenBank) conserved hypothetical protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
bps  Burkholderia pseudomallei K96243
Pathway
bps03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bps00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BPSS0078
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bps02044]
    BPSS0078
Secretion system [BR:bps02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   BPSS0078
SSDB
Motif
Pfam: Phage_GPD DUF2345 T6SS_Vgr Phage_base_V DUF6296 DUF3540 DUF6484 Sarcoglycan_1 Phage_Mu_Gp45
Other DBs
NCBI-ProteinID: CAH37523
UniProt: Q63P68
Position
2:88921..91692
AA seq 923 aa
MNDTLRNFASGAVDWNKRPVALHFGAAQAALGHLLALQHASVQEGLMTGIHGRLTCVSTR
RDLPPGVLLGIPVSIRLITDRGQPHTVNAIISDVQIGQSDGELCVYQLTVCDALSLMDKR
TNSRVFRKRSVIDVLATLFNEWQQRSPALARAFEFDLSGLRADRYPPRELTRQVNESDAH
FVRRLLRREGITVFAKAGPAKGERPLQGDAPVHTLVCCDDPMSLPQAPAGTVRLHPRDGG
AAQRDTVTLFALRRQLAPGKAGRPSWDYKKARIDESSVASSLDQGEAGNDLAKLLTDIAI
DIAHAGDSWRDHERLTRARMLAHEFEAERHDGVSSVRDLAVGTWITLTGDPQWDRQRADK
RQFVITSIDHDIWNNLPKGLNERVHALFAASRNLAYAPRALPSALANDADTRYENTFACV
RRGVPLAPAYDPQADLPPAHLLTGTIVGAEGEEVFCDEDGRVRVRVHGLDPADHAHAQGA
GTNGNAGDSAPIRVASSLAGAHFGASFLPRVGMEVLLGCLGGDPDRLVIIGVLGNGAHPP
ATFSHAGGLPGNRYLSGIKTKEIRGQRYNQLRLDDTPNQISAQLASEHAHSQLNLGYLTQ
PRENGHGNDRGEGVELRTDAAAALRAAQGMLLTTYARTQASGGQLDRDELIRLLGECAEL
FKALGDYAGQHGGQAADTAGQHAVAAAFKRWAPGTDGADAPSDGAARALMAFGAQAGSVN
VTPKTHVTYAGENIDQVAQQHLQLMSGQRLNATAGQGMQLFARGAGVQAVAGEGPMLLQA
QAGTLTANAQKGVKITTNEHEVFVSAPKIRLVAEDGSYLELGGGITLGTNGDIKLLSASH
QWGGPSTAQAAKSGFGNQPTDQRFKLHYPGEDGDLQAAANKRFRITLDDGRVIEGKTDAS
GLTDLVKDDAMRIAKIDYLKPKL
NT seq 2772 nt   +upstreamnt  +downstreamnt
ttgaacgatacgctacgcaattttgcgtcgggggcggtcgactggaataaacgtccggtc
gcgttgcactttggcgccgcgcaggccgcgctgggccacctcctcgcgctgcagcacgcc
agtgttcaggaagggctgatgaccgggatccacggccgattgacctgcgtgtcgacccgc
cgcgaccttccgcccggcgtgttgctcggcattccggtttcgatccggctgatcaccgac
cgcggacagccgcacacggtgaacgcgatcatcagcgacgtccagatcggccaaagcgac
ggcgagctctgtgtgtaccagctgacggtctgcgacgcgctgtcgctgatggacaagcgt
accaattcgcgggtcttccgaaagcgcagcgtcatcgatgtgctcgccacgctgttcaac
gaatggcagcagcgcagcccggccctcgcgcgcgcgttcgaattcgatctgtccggcttg
cgcgccgatcgctatccgccccgcgagctgacccggcaggtcaacgaatcggatgcgcat
ttcgtgcgccgtctgctgcgccgcgaagggatcaccgtgttcgcgaaggcggggccggcg
aagggcgaacggccgttgcagggcgacgcgcccgtgcacacgctcgtgtgctgtgacgat
ccgatgtcgttgccgcaagcgccggccggcacggtccgcttgcatccgcgcgacggcggc
gccgcgcagcgcgacacggtcacgctgttcgcgctgcgtcggcaattggcgcccggcaag
gccggccgcccgtcgtgggactacaagaaggcgcggatcgacgaatcgagcgtcgcttcg
agcctcgatcagggcgaggcgggcaacgatctggcgaagctgctgaccgacatcgcgatc
gacattgcgcacgcgggcgattcatggcgcgatcacgagcggctcacccgcgcgcgcatg
ctcgcgcacgagttcgaagccgagcgccatgacggcgtcagcagcgtgcgggatctcgcc
gtgggcacatggatcacgctgacgggcgatccgcaatgggacaggcaacgcgccgacaag
cgtcagttcgtgatcacgtcgatcgatcacgacatctggaacaacctgccgaaggggctc
aacgagcgcgtgcacgcgctgttcgccgcgagccgcaatctcgcgtacgcgccccgcgcg
ctgccgtccgcgctggcgaacgacgcggatacccgctacgagaacacgttcgcgtgcgtg
cgccgcggcgtgccgcttgcgcccgcgtacgatccgcaagccgatttgccgcccgcgcat
ctgctcacgggcacgattgtcggcgcggagggcgaagaagtgttctgcgacgaagacggc
cgggtgcgcgtgcgggtgcacggcctcgatccggcggatcacgcgcacgcgcagggcgcg
ggcaccaacggcaacgcgggcgacagcgcgccgatccgcgtggcgtcgagcctcgccggc
gcccatttcggcgcatcgttcctgccgcgagtcggcatggaagtcctcctcggatgtctc
ggcggcgatccggaccggctggtgatcatcggcgtgctcggtaacggcgcgcatccgccg
gcgacgttcagccacgcgggcgggctgccgggcaaccgctacctgtcgggcatcaagacg
aaggagattcgtgggcaacggtacaaccagctgcgtctcgacgacacgccgaaccagatc
agcgcgcaactggcgagcgagcacgcgcattcgcagctcaatctcggatatctgacgcaa
ccgcgcgagaacggccacgggaacgaccgcggcgagggcgtggagttgcgtaccgacgcg
gcggcggcgctgcgggcggcgcaaggcatgctgctgacgacctatgcgcgcacgcaggcg
agcggcgggcaactggaccgtgacgagctgattcggttgctcggcgaatgcgcggagctg
ttcaaggcgctgggcgactacgcggggcagcacggcgggcaggccgcggatacggccggc
cagcacgcggtggccgccgcgttcaagcgctgggcgccgggcacggacggcgccgatgcg
ccgtccgacggcgcagcgcgcgcgctgatggcgttcggcgcgcaggccggttcggtgaac
gtcacgccgaagacgcatgtgacgtatgccggcgagaacatcgatcaggtcgcgcagcag
cacctgcaactgatgagcggccagcggctgaacgcgacggccgggcagggcatgcagctc
ttcgcgcggggcgcgggggtgcaggccgtggcgggcgaagggccgatgctgctgcaggcg
caagccggcacgctgacggcgaacgcgcagaagggcgtcaagatcacgacgaacgagcac
gaggtgttcgtgagcgcgccgaagattcggctcgttgccgaggacggcagctacctcgag
ctcggcggcggcatcacgctcggcacgaacggcgacatcaagctgctgtcggcgtcgcac
cagtggggcgggccgtcgaccgcgcaggcggcgaagagcgggttcggcaatcagccgacg
gatcagcgtttcaagctgcactatccgggcgaggacggcgatttgcaggcggcggcgaac
aagcggttccggatcacgctggacgacgggcgcgtcatcgaaggcaagaccgacgcgagc
ggcctgacggatctggtcaaggacgacgcgatgcgtatcgcgaagatcgactatctgaag
ccgaagctttga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system