KEGG   Bifidobacterium pseudocatenulatum: BBPC_0147
Entry
BBPC_0147         CDS       T03932                                 
Name
(GenBank) DNA polymerase III gamma and tau subunits
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
bpsc  Bifidobacterium pseudocatenulatum
Pathway
bpsc03030  DNA replication
bpsc03430  Mismatch repair
bpsc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpsc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BBPC_0147
   03430 Mismatch repair
    BBPC_0147
   03440 Homologous recombination
    BBPC_0147
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpsc03032]
    BBPC_0147
   03400 DNA repair and recombination proteins [BR:bpsc03400]
    BBPC_0147
Enzymes [BR:bpsc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BBPC_0147
DNA replication proteins [BR:bpsc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BBPC_0147
DNA repair and recombination proteins [BR:bpsc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BBPC_0147
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 RuvB_N AAA_22 AAA_30 zf-CXXC AAA_14 AAA_2 AAA_19 Rad17
Other DBs
NCBI-ProteinID: BAR02825
UniProt: C0BR52
Position
196081..198711
AA seq 876 aa
MALALYRRYRPDTFDGVIGQDQVTIPLMRALDENKLTHAYLFSGPRGCGKTSSARILARC
VNCAKGPTSHPCGECESCKDLATGGPGSIDVVEIDAASHNGVDDARELRERAGFAPARDR
YKIFILDEAHMVTPQGFNALLKIVEEPPEHVMFIFATTEPDKVIGTIRSRTHHYPFRLVP
QEVMGPYLERICEDEHIEAEPGVLRLAMRAGGGSVRDTLSVLDQLMVGAVDGSIAYDSAV
ALLGFTPDALIGEAVDAVVDKNGEALYGVIQKVVVGGFDPRRFVEDLLARVRDLLVLTLG
GERAESVLSDDAAAENMDDLRRQASALGLSALTQMADTINATLANMTGAISPRMRLELLA
ARLLAGREEGMAVVASSSGVPDFAGDAGTSAAAESSRGSMAGSRRRAARHAAGNVRAQDS
APVIDTPSAPVQPSVAPTNPADAVASGVASVLADVQQAMNATTSVASAAPAATSVPAPIH
DDRTPDQKWDALVAALPEDVQRYVSREKVPRVLLSGDSLWIKFDKALSKYAFAKGVAKES
VDGTTEVVKIVRAEVHKVFGPNVTLAPAKKLADGSESVPWSKLSPEEQSKINVQLAQERL
KSATLLTANLGTAASLESSGKESASKSGQKTEDGGNAGNSNDEEGHRAEAEAAAEADPWA
NPQPAAPAQPQQESDPWGSPAPVAQHVEQSIPDDDPWGAPAQPMQSQSVVASGVNDVKAP
EQHTKHVAVPDISDNVDPWAVPMPDPLPTPVDDDPWGAPMPVQAGPAEPSPAPVEPETAP
KHANHQHRAPRQEAAPQQGQPNADPWSQQFSAPAQPTPQVAAEDDEYSMSDESIGASSAL
SVDDLTRLFEVKKVEDFGPDDAKNPRNMQQKKNLDD
NT seq 2631 nt   +upstreamnt  +downstreamnt
atggcactggcactctatagaaggtatcgtcccgacacgttcgacggcgtgatcgggcag
gatcaggtcacgattccgctgatgcgagcgcttgatgagaacaaacttacgcacgcttac
ctgttttccggtccgcgcggctgcggcaaaaccagttccgcacgcattctcgcgcgttgc
gtcaactgcgcgaaaggcccgacctcgcacccgtgcggcgaatgcgaaagctgcaaggac
ctcgccacaggcggccccggttccatcgacgtggtggaaatcgacgccgcttcgcacaac
ggtgtggacgatgcccgcgaactgcgcgaacgtgccggattcgcccccgcccgcgaccgc
tacaagattttcattctcgacgaagcccacatggtcacgccgcaaggcttcaacgcgctg
ctgaaaatcgtggaggagccgccggagcatgtgatgttcatcttcgccaccaccgagcca
gacaaggtgatcggcaccatccgttcgcgcacccaccattacccgttccgcctagtgccg
caggaggttatgggcccgtacctcgagcggatctgcgaagacgagcatatcgaagccgag
ccgggcgtgctgcgccttgccatgcgtgccggcggcggttccgtgcgagacaccctttcc
gtgcttgaccagctcatggtcggtgcggtcgatggcagcatcgcatacgactccgcggtt
gcgttgcttggcttcacgcctgacgctctgatcggcgaggccgtcgacgccgttgtcgac
aaaaatggcgaagcactgtatggcgtgattcagaaggtcgtggtcggtggtttcgatccc
cgtcgatttgttgaggatttgcttgcccgcgtacgcgatttgctggtgctcacgttgggt
ggagagcgtgcggaaagcgtgctttccgacgatgcggccgccgagaacatggatgatttg
cgtcgtcaggcttccgctttgggattgtctgcgctgacgcagatggctgacacgatcaat
gcgacgcttgccaatatgaccggtgcgatttcgccgcgcatgcgattggaattgcttgcc
gcgcgcttgttggccgggcgtgaggaagggatggctgtcgttgcgtcatcttccggtgta
cctgattttgccggcgatgccggaacttccgcggctgccgaatcgtcgcgtggatccatg
gccggctcccgtcgccgtgcggcacgacatgccgcaggaaatgtgcgggcgcaggattct
gcgcctgtgatcgataccccttccgcgcctgtgcagccgtccgtggcgccgacgaatcct
gccgatgccgtcgcatccggcgtggcttccgtgcttgctgacgtgcagcaggcgatgaat
gcgacgacttccgtcgcttccgctgcgcctgccgcaacttccgtaccagctcccattcat
gacgatcgcacccccgaccagaagtgggatgcgctggtcgcagcccttccggaagacgtg
caacgttacgtaagccgtgaaaaagtgcctcgcgtgctactgagcggcgacagcttgtgg
atcaaattcgacaaggcgctcagcaaatacgcgttcgccaagggcgtggcgaaggagtcg
gtggatggaaccaccgaagtggtgaaaatcgtccgcgccgaagtacataaggtgttcggc
ccgaatgtcacgcttgcccccgccaaaaagctggcggacggttccgaatcggtgccgtgg
agcaagcttagtccggaagagcaaagcaagatcaacgtgcagctggcgcaggagcgactc
aaatccgcaacactgctgaccgcgaatcttggcaccgccgcaagtcttgaatcctccggc
aaagagtcggcaagcaagagtggacaaaaaaccgaagatggcggcaatgccgggaattcc
aacgatgaggagggccaccgagccgaggcggaggcagccgccgaagctgatccgtgggca
aatccgcaaccggctgcgcctgcgcaaccgcagcaagaatccgatccgtgggggagtccc
gcgccagtagctcaacatgtggaacagtccattccagatgatgatccgtggggcgcgccc
gcacaaccgatgcaatcgcaatcggtggttgcaagcggcgtcaacgatgtgaaagcgccg
gaacagcatacgaaacatgtggccgttcccgatatcagcgacaacgttgatccgtgggcc
gtgccgatgccagacccgcttccaactccggtggacgacgatccttggggtgcccctatg
ccagttcaggcagggccggcggagccgtctcccgctccagtggaacctgaaacggctcct
aagcatgccaatcaccagcatcgcgcacctcggcaggaagcggcaccgcagcaaggccag
ccgaacgccgatccatggagccaacagttctccgcgcctgcgcagccaacaccgcaggtc
gccgcggaagacgacgaatattccatgagcgacgaatcgatcggagcgtccagcgcgtta
agcgtggatgatctgacacgactattcgaagtgaaaaaagtcgaggatttcggccccgac
gacgccaaaaacccgcgcaacatgcagcagaagaagaatctcgacgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (11)   
   Pfam (11)   
All databases (24)   

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