KEGG   Burkholderia pseudomallei MSHR520: BBX_259
Entry
BBX_259           CDS       T03163                                 
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
bpsd  Burkholderia pseudomallei MSHR520
Pathway
bpsd03030  DNA replication
bpsd03430  Mismatch repair
bpsd03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpsd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BBX_259 (dnaN)
   03430 Mismatch repair
    BBX_259 (dnaN)
   03440 Homologous recombination
    BBX_259 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpsd03032]
    BBX_259 (dnaN)
   03400 DNA repair and recombination proteins [BR:bpsd03400]
    BBX_259 (dnaN)
Enzymes [BR:bpsd01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BBX_259 (dnaN)
DNA replication proteins [BR:bpsd03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     BBX_259 (dnaN)
DNA repair and recombination proteins [BR:bpsd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     BBX_259 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta_2 DNA_pol3_beta DNA_pol3_beta_3
Other DBs
NCBI-ProteinID: AHK64688
Position
1:279752..280855
AA seq 367 aa
MQLVKTERDTLLRPLQTVSGIVERRHTLPILANLLITKNGPDVSFLSTDLELQITTRADF
GVGGDQVATTVAARKLLDILRAMPDGQVTLSLADKRLTVQSGKSRFALQTLAADEFPTVA
QSKDFGASLAVPQKAFRQLLGMVYFAMAQQDIRYYLNGMLLVVDGDRLMAVATDGHRLAF
SSMKIEGSFGRQEVIVPRKTILELQRLLEDIDDTVKIDIAQTQAKFTFGQVELVSKLVEG
KFPDFQRVIPKAHKNTFEIGREELQRSLQRAAILTSDKFKGVRCIIAPGQLKIMSTNADQ
EEAQEELEIAYQGDTVDIGFNVTYLLDVLANLKVDTVQVSLGDASSSALITVPENDEFKY
VVMPMRI
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgcaactggtcaagaccgaacgagacaccctccttaggccgctgcaaaccgtgagcggt
atcgtcgaacgccgccacacgttgccgatcctcgccaatctgttgatcacgaagaacggc
ccggacgtgtcgttcctgtcgaccgacctcgagctccagatcacgacgcgcgccgatttc
ggcgtcggcggcgatcaggtcgcgacgaccgtcgcggcccgcaagctgctcgacatcctg
cgcgcgatgcccgacggccaggtcacgctgtcgctcgccgacaagcgcctgacggtccag
tccggcaagagccgcttcgcactgcaaacgctcgcggccgacgagttcccgaccgtcgcg
caatcgaaggatttcggcgcaagcctcgccgttccgcagaaggcgttccgccagttgctc
ggcatggtgtacttcgcgatggcgcagcaggacatccgctactacctgaacgggatgctg
ctcgtcgtggacggcgaccgcctgatggcggtggcgaccgacggccaccgcctcgcgttc
tcgtcgatgaagatcgaaggctcgttcggccgccaggaagtgatcgtgccgcgcaagacg
attctcgagctgcagcgcctgctcgaggacatcgacgacacggtcaagatcgacatcgcg
cagactcaggcgaagttcacgttcggccaggtcgagctggtgtcgaagctcgtcgagggc
aagttcccggacttccagcgcgtgattccgaaggcgcacaagaacacgttcgagatcggc
cgcgaagagttgcagcgctcgctgcagcgcgcggcgatcctcacgtccgacaagttcaag
ggcgtgcgctgcatcatcgcgcccggccagttgaagatcatgtcgacgaacgccgatcag
gaagaggcgcaggaagaactggaaatcgcctaccagggcgacaccgtcgacatcggcttc
aacgtcacgtatctgctcgacgtgctcgcgaacctgaaggtcgacaccgttcaggtgagc
ctcggcgacgcgagctcgagcgccctcatcaccgtgcccgagaacgacgaattcaagtac
gtggtgatgccgatgcgcatctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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