KEGG   Burkholderia pseudomallei MSHR305: BDL_1781
Entry
BDL_1781          CDS       T02756                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
bpse  Burkholderia pseudomallei MSHR305
Pathway
bpse00300  Lysine biosynthesis
bpse00470  D-Amino acid metabolism
bpse01100  Metabolic pathways
bpse01110  Biosynthesis of secondary metabolites
bpse01120  Microbial metabolism in diverse environments
bpse01230  Biosynthesis of amino acids
Module
bpse_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:bpse00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    BDL_1781 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    BDL_1781 (dapF)
Enzymes [BR:bpse01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     BDL_1781 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: AGR70771
Position
2:2124449..2125318
AA seq 289 aa
MKLSFTKMHGAGNDFVVLDGYTRALPPLTGAQVRALADRHFGIGADQLLLVEKPTVDGAD
FKYRIFNCDGGEVEHCGNGARCFVKFVRDHGLTGKASVRVEVKHGVITLTMQDNGEVVVD
MGAPVFEPARVPFDASGLDGRREGADTLWPLPVNGVTRWISVVSMGNPHAVQIVDDAEAF
AVRVDGPAIERDPRFPQRVNAGFMQIVSRHEVNLRVYERGAGETLACGTGACAAVAAGIR
RGRLDSPVTVHTHGGTLTISWNGACDERAPLMMAGPATTVFEGVIELPA
NT seq 870 nt   +upstreamnt  +downstreamnt
atgaaactctcgttcaccaagatgcacggcgcgggcaacgacttcgtcgtgctcgacggc
tacacccgcgcgctgcccccgctcaccggcgcgcaggtgcgcgcgctcgccgaccgccac
ttcgggatcggcgccgatcagttgctgctcgtcgaaaagccgaccgtcgacggcgccgat
ttcaaataccggatcttcaactgcgacggcggcgaagtcgagcactgcggcaacggcgcg
cgctgcttcgtcaagttcgtccgcgaccacgggctcaccggcaaggcgagcgtgcgcgtc
gaggtgaagcacggcgtgatcacgctgacgatgcaggacaacggcgaggtcgtcgtcgac
atgggcgcgcccgtgttcgagccggcgcgcgtgccgttcgacgcgagcggcctcgacggc
cgccgcgagggcgccgacacgctctggccgctgcccgtgaacggcgtgacgcgctggatc
tcggtcgtgtcgatgggcaatccgcacgcggtgcagatcgtcgacgacgccgaggcgttc
gcggtgcgcgtcgacgggccggcgatcgagcgcgatccgcgtttcccgcagcgcgtgaac
gcgggcttcatgcagatcgtgtcgcgtcacgaagtgaacctgcgcgtctacgagcgcggc
gcgggcgaaacgctcgcgtgcggcacgggcgcgtgcgcggccgtcgcggccggcatccgg
cgcgggcgactcgattcgcccgtcacggtccatacgcacggcggcacgctgacgatctcg
tggaacggcgcgtgcgacgagcgcgcgccgctcatgatggccggccccgcgaccaccgtc
ttcgaaggcgtgatcgagctgcccgcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (20)   

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