KEGG   Burkholderia pseudomallei MSHR511: BBQ_3
Entry
BBQ_3             CDS       T03012                                 
Name
(GenBank) RNA polymerase sigma factor, FliA/WhiG family protein
  KO
K02405  RNA polymerase sigma factor FliA
Organism
bpsm  Burkholderia pseudomallei MSHR511
Pathway
bpsm02020  Two-component system
bpsm02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:bpsm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BBQ_3
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BBQ_3
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpsm03021]
    BBQ_3
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:bpsm02035]
    BBQ_3
Transcription machinery [BR:bpsm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BBQ_3
Bacterial motility proteins [BR:bpsm02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    BBQ_3
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 HopW1-1 UPF0122
Other DBs
NCBI-ProteinID: AHG35494
Position
1:2581..3312
AA seq 243 aa
MYNAQGKISQDEVLTQYAPLVRRLGLQLVAKMPASVDLDDLIQAGMIGLLDAASRYKEDQ
GAQFETYATQRIRGAMLDELRSNDWLPRSLRKTSREVEHAVHQVEQRLGRSANETEIAAH
LQMPLDEYQSMLQDLHGSQLVYYEDFDRSADDEPFLDRYRADHSDPLSALLDEHLRSALV
DAIERLPEREKLLMSLYYERGLNLREIGAVLEVSESRVCQLHSQAVARLRAKLREQAWVG
TES
NT seq 732 nt   +upstreamnt  +downstreamnt
atgtataacgctcaaggcaagatttcccaggacgaagtgctgacgcaatacgcgccgctc
gtgcgtcgtctcggcctgcagctcgtcgcgaagatgccggcgagcgtggacctcgacgat
ctgatccaggcgggcatgatcggcctgctcgacgcggcgagccgctacaaggaagatcag
ggcgcgcagttcgagacctacgcgacgcagcgcatccgcggcgcgatgctcgacgagctg
cgcagcaacgattggctgccgcgcagcctgcgcaagacctcgcgcgaagtcgaacatgcg
gtgcatcaggtcgagcagcggctcggccgctcggcgaacgagacggagatcgccgcgcac
ctgcagatgccgctcgacgaataccagtcgatgctgcaggatctgcacggcagccagctc
gtctactacgaggacttcgaccgctcggccgacgacgagccgtttctcgaccgctaccgc
gccgatcacagcgatccgctgtcggcgctgctcgacgagcatctgcgcagcgcgctcgtc
gatgcgatcgagcgcctgccggagcgcgagaagctgctgatgtcgctgtactacgagcgc
gggctgaacctgcgcgagatcggtgcggtgctcgaggtgagcgagtcgcgcgtgtgccag
ttgcatagccaggcggtcgcgcggctacgcgcgaagctgcgcgagcaggcgtgggtcggc
acggagagctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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