KEGG   Burkholderia pseudomallei A79A: X996_2141
Entry
X996_2141         CDS       T03498                                 
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
bpso  Burkholderia pseudomallei A79A
Pathway
bpso03030  DNA replication
bpso03430  Mismatch repair
bpso03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bpso00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    X996_2141 (holB)
   03430 Mismatch repair
    X996_2141 (holB)
   03440 Homologous recombination
    X996_2141 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bpso03032]
    X996_2141 (holB)
   03400 DNA repair and recombination proteins [BR:bpso03400]
    X996_2141 (holB)
Enzymes [BR:bpso01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     X996_2141 (holB)
DNA replication proteins [BR:bpso03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     X996_2141 (holB)
DNA repair and recombination proteins [BR:bpso03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     X996_2141 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA_16 DNApol3-delta_C nSTAND3
Other DBs
NCBI-ProteinID: AIV96129
Position
1:2417751..2418785
AA seq 344 aa
MIYPWQTDDWNRLQALRAHWPHALLLYGQAGIGKLAFARHLAKGFLCETPRENGEPCGAC
AACTWFEQGNHPDYRIVVPEALAAELPGAADEPKAADADEGGKKARTPSKEIKIEQVRAL
VDFCGIASHRGGARVVVLYPAEALNVAAANALLKTLEEPPSGVVFLLASARVDRLLPTIV
SRCRQWPMAVPAPDAAAAWLAAQQVADANALLAEAGGAPLAALALANDENRPLRDWTLAQ
LAAGAACDPFACGETLQKLPVPVVLGWLQRWLYDLLAERAAGAPRYFPAQRAALARCAAA
ADANAFARFLKTVTRQRAVENHPLSARLVFEELFLGYRELFASP
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgatctatccgtggcagaccgacgactggaaccgcctgcaggcgctgcgcgcgcattgg
ccgcacgcgctgctgctgtacgggcaggcgggaatcggcaagctcgccttcgcgcggcac
ctcgcgaagggcttcttgtgcgagacgccgcgcgagaacggcgaaccgtgcggcgcgtgc
gccgcgtgcacgtggttcgagcagggcaatcaccccgattaccggatcgtcgtgcccgag
gcgctcgcggccgagctgccgggcgcggccgacgagccgaaggccgccgacgccgacgaa
ggcggcaagaaggccaggacgccgagcaaggaaatcaagatcgagcaggtgcgcgcgctc
gtcgacttctgcgggatcgcgtcgcatcgcggcggcgcgcgcgtcgtcgtgctgtatccg
gccgaggcgctgaacgtcgcggccgcgaacgcgctattgaagacgctcgaggagccgccg
tcgggcgtcgtgttcctgctcgcgtccgcgcgcgtcgaccggctgctgccgacgatcgtg
agccgctgccggcagtggccgatggcggtgcccgcgcccgacgcggccgccgcgtggctc
gcggcgcagcaggtggcggacgcgaacgcgctcctcgccgaggcggggggcgcgccgctc
gccgcgctcgcgctcgcgaacgacgagaaccggccgctgcgcgactggacgctcgcgcag
ctcgcggcgggcgccgcgtgcgatccgttcgcgtgcggcgagacgctgcagaaactgccc
gtgcccgtcgtgctcggctggctgcagcgctggctgtacgatctgctcgccgagcgcgcg
gcgggcgcgccgcgctatttccccgcgcagcgcgcggcgctcgcgcgctgcgcggcggcg
gccgacgcgaacgcgttcgcgcgcttcctgaagacggtcacgcggcagcgcgcggtggag
aaccatccgctcagcgcgcgcctcgtgttcgaagagctgtttctcggctatcgggaactg
ttcgcgtcgccctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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