KEGG T03498: X996

Burkholderia pseudomallei A79A: X996_5081

Entry

X996_5081         CDS       T03498

Name

(GenBank) RNA polymerase sigma factor, sigma-70 family protein

K03088

RNA polymerase sigma-70 factor, ECF subfamily

Organism

bpso Burkholderia pseudomallei A79A

Brite

KEGG Orthology (KO) [BR:bpso00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bpso03021]
    X996_5081
Transcription machinery [BR:bpso03021]
Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     X996_5081

SSDB

Motif

Pfam:

Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_16 HTH_17

Other DBs

NCBI-ProteinID:

AIV93109

Position

2:complement(2099767..2100474)

AA seq 235 aa
MTRTMTTEQRSGDMQPSRVDDRALAARVAGGDHAAFEQLMRRYNRRLYRLARATLRDDAQ
AEDVLQEAYLAAFRTIGRFRGDASLSTWLSRLVLNACFTRQRRGARRDNIAPMVNTSSIA
GFERTTMDADLTSSPDHALMRTELRALLERKLDALPEAFRLVFVLRCVEELSVEETAQCL
GIPEATVRSRHFRAKRLLRESLAREIDSAGRDVFSFAGERCDRIVRGVLARLISP

NT seq 708 nt +upstreamnt +downstreamnt
atgacccgaacgatgacgaccgagcagcgatcgggcgacatgcagccttcgcgcgtggac
gaccgcgcgctggccgcgcgggttgccggcggcgatcatgcggcattcgagcaattgatg
cgccgctacaaccggcgcctctaccggcttgcgcgcgcgacgttgcgcgacgacgcgcaa
gccgaagacgtgcttcaggaggcctatctggccgcatttcgcaccatcgggcgctttcgc
ggcgacgcatcgctgtccacctggctgtcgcgcctcgtgctcaacgcgtgctttacgcgc
cagcgccggggcgcccggcgcgacaacatcgccccgatggtgaatacatcgtccatcgcc
ggcttcgagcgcactaccatggatgcggacctaacctcctcgcccgatcatgcactcatg
cgcacggagctgcgtgcattgctcgagcgcaagctcgatgcgttgcccgaggcttttcgc
ctcgtgttcgtcctgcgttgcgtggaggagttgagcgtcgaggagaccgcgcagtgtctc
ggcataccggaggccaccgtgcgatcgcgccattttcgggcgaagcgcttactgcgcgaa
tcgctcgcgcgggaaatcgattcggccgggcgcgacgtgttctcgttcgccggcgagcgc
tgcgaccgcatcgtccgcggcgtactggcgaggctgatttcgccctga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (13)   

Download RDF

DBGET integrated database retrieval system