KEGG   Bifidobacterium pseudolongum: AH67_05895
Entry
AH67_05895        CDS       T03529                                 
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
bpsp  Bifidobacterium pseudolongum
Brite
KEGG Orthology (KO) [BR:bpsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bpsp03016]
    AH67_05895
Enzymes [BR:bpsp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     AH67_05895
Transfer RNA biogenesis [BR:bpsp03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AH67_05895
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC
Other DBs
NCBI-ProteinID: AIZ16493
UniProt: A0A0A7I8C7
Position
complement(1313650..1314936)
AA seq 428 aa
MNDEPVLLREPREGVPQVTDTLEGFEDYCDRLSAASGPLAADAERASGYRYGHDDWLIQF
KRDGAGIGLLDPMVLNAIGVDWGMFNRAVGDATWILHDAKQDLPGFAQLSLTPHALFDTE
IAARILGLHRFGLAYVTEHYLGMTLAKEHSAADWSYRPLPRDWRNYAALDVELLIPLAHK
MTIDLKRAGKWEWACQEFEYVLRTELHPRRPHAVPWLRISHINTIQRDRRALAIAKELWT
ERDELARRYDIAPSLLLADSSIIEAAQAKPHNARQFRAIRSLNERVRMHLGTDQDKMFER
YAPIQRKVKPSVWKQAIQRALELPEGELPVMPAPEGGATQVNAPKSMKLWQKHHPDRFRR
LQACRALINQVSQDTHTPPDVLIKPQIVRNLCWTDNPGARDVAGFLEEQGARPWQIHLLA
ASLTRGIM
NT seq 1287 nt   +upstreamnt  +downstreamnt
gtgaacgacgagcccgtgttgctgcgggaaccccgggaaggcgtcccacaggtgaccgac
accctggaaggcttcgaagactactgtgacaggctgtcagcggcgtccgggccgctcgcg
gccgacgccgagcgtgcgtcggggtaccgctacggccacgacgattggctcatccaattc
aaacgcgacggcgccggtatcggattgctcgacccgatggtgttgaacgcgatcggtgtg
gactggggcatgttcaaccgcgccgtcggtgacgccacatggatcctgcacgacgcgaag
caggaccttcccggcttcgcccagctctcgctcacaccccatgcgctgttcgacaccgag
atcgccgcgcgcatcctgggccttcatcgcttcggcctcgcctatgtgaccgagcattat
ctgggcatgacgcttgcgaaagagcactccgccgccgactggtcgtaccggccgctgccg
cgcgactggcgcaattacgcggcgctcgacgtggaactgctcatcccgctcgcgcacaag
atgacgattgacctcaaacgcgcgggcaaatgggaatgggcatgtcaggaattcgagtat
gtgctgcgcacggagctgcacccccggcgcccccatgcggtgccctggctgcgcatatcg
cacatcaacaccatccaacgcgaccgccgcgcactcgccatcgccaaggaactgtggacc
gaacgcgacgagctcgcccggcggtacgacatcgccccgagcctgctgctcgccgactcg
tcgatcatcgaagccgcacaggccaaaccgcacaacgccaggcagttccgtgccatccgc
tcgctcaacgagcgcgtgcgcatgcacttgggcaccgaccaggacaagatgttcgagcgg
tatgcgccgatccaacgcaaagtcaagccgagcgtgtggaagcaggccatccagcgcgcg
ctggaattgcccgagggcgaattgccggtcatgccagcgccggaagggggcgccacgcag
gtgaacgcgccgaaatccatgaaactctggcaaaagcaccatccggaccgcttcaggcgt
ctgcaggcgtgccgggcgctcatcaaccaggtctcgcaagacacgcatacgccgccggat
gtgctgatcaaaccgcagatcgtgcgcaacctgtgctggaccgacaacccgggcgcgcgc
gatgtggccggattccttgaggaacagggcgcccgcccatggcagattcatctgttggca
gcgtcgctgactcgcggtatcatgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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