KEGG   Burkholderia pseudomallei MSHR146: BBN_1124
Entry
BBN_1124          CDS       T03024                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
bpsu  Burkholderia pseudomallei MSHR146
Pathway
bpsu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:bpsu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BBN_1124 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bpsu03400]
    BBN_1124 (xth)
Enzymes [BR:bpsu01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     BBN_1124 (xth)
DNA repair and recombination proteins [BR:bpsu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     BBN_1124 (xth)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: AHG69305
Position
1:complement(1230700..1231476)
AA seq 258 aa
MRIATWNVNSLNVRKQHVLDWLAQSDVDVLCLQELKIPDEKFPREALEAAGYRSWFAGQK
TYNGVAILARASLPFDETDIVRNIPGFEDAQQRLIAATIDGVRIVSAYFPNGQALDSDKF
VYKMQWLDALRAWLKDELQRYPKLALLGDYNIAPEDRDVHDPAKWEGQNLVSPQERAHFA
QLVALGFVDAFRRFEQPEKTFTWWDYRMLAFRRNAGLRIDHILLSPALAETCTSCTVDRV
PRTWEQPSDHTPVVAQLG
NT seq 777 nt   +upstreamnt  +downstreamnt
atgagaatcgccacctggaacgtcaactccctgaacgtgcgcaagcagcacgtgctcgac
tggctcgcgcagagcgacgtcgacgtgctgtgccttcaggagctcaagatccccgacgag
aagtttccgcgcgaagcgctcgaagcggccggctaccgcagctggttcgcgggccagaaa
acctacaacggcgtcgcgatcctcgcgcgcgcgagcctgccgttcgacgagacggatatc
gttcgcaacatccccggcttcgaggacgcgcagcagcgcctgatcgccgcgacgatcgac
ggcgtgcggatcgtgtccgcgtacttcccgaacggccaggcgctcgactcggacaagttc
gtctacaagatgcaatggctcgacgcgctgcgggcatggctgaaggacgagctgcaacgc
tacccgaagctcgcgctgctcggcgactacaacatcgcgcccgaagatcgcgacgtgcac
gatccggcgaaatgggaaggccagaatctggtgtcgccgcaggagcgcgcgcatttcgcg
cagctcgtcgcgctcggcttcgtcgacgcgttccgacgcttcgagcaacccgagaagacc
ttcacgtggtgggattaccggatgctcgcgttccgccgcaacgccgggctgcggatcgat
cacatcctgctgtcgccggcgctcgccgaaacctgcacgagctgcaccgtcgaccgcgtg
ccgcgcacgtgggagcagccgtccgaccacacgcccgtcgtcgcgcagctcggctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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