KEGG   Bordetella petrii: Bpet0569
Entry
Bpet0569          CDS       T00637                                 
Symbol
rnb
Name
(GenBank) rnb
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
bpt  Bordetella petrii
Brite
KEGG Orthology (KO) [BR:bpt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bpt03016]
    Bpet0569 (rnb)
Enzymes [BR:bpt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     Bpet0569 (rnb)
Transfer RNA biogenesis [BR:bpt03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Bpet0569 (rnb)
SSDB
Motif
Pfam: RNB
Other DBs
NCBI-ProteinID: CAP40901
UniProt: A9I1V4
Position
complement(626874..628763)
AA seq 629 aa
MYVFYEEDGGFKAANILSETDASLQVESESGKRSKIKRANTLFTFAEPAPAALLAEAAQA
ADALDLQFLWECAPQEEFDAAALAADYFGHAPSAVEQAALLMRLHGAPAYFHRRGKGRYR
PAPPDILAAALAALEKKQKQAEQQQQWVDEMAAGRLPGEIAQAAESLLIRPDKNSMQWKA
LDAACARQQKSPDRLLLELGAWPHPLALHKRRFLATYFPRGTGFPDAAIPPLARDLPLAD
AELYSVDDITTTEIDDALSVTPLPDGKVRVGIHVAAPGLAVTRGSELDKLARARLSTVYM
PGEKIPMQPDHVIQAFSLDAGREVPALSLYVTADPATGEISATETRVERVVVRENLRHNE
LDGQVTEAALNDPDAPLPYGHWLRPLWRLASALSAQRDIVRGKPENNSRVEYSFYLDGDP
DNPDTPVRLVPRQRNAPLDRMVAEYMILANNVWGGLLHQHGVPGIYRSQQAGRVRMSTQA
LPHEAIGVPQYAWSTSPLRRYVDLVNQWQLIAAVEHGVSARLVAPFKPRDADLFAIIGAF
DAQYAAWNEFQGNMERYWCLRWLQQQGITRTVAHVLREDLVRLANAPLVMRVGGLPELER
GMAVELDILGMDELTLEVDCRYVGVVGGA
NT seq 1890 nt   +upstreamnt  +downstreamnt
atgtacgtgttttacgaagaagacggcggcttcaaggctgccaacatcctgtcagaaacc
gacgccagcctgcaggtggagtcggaatcgggcaagcgcagcaagatcaagcgcgccaac
acgctgttcacgttcgccgagccggcgccggccgcgctgttggccgaggcggcgcaggcc
gccgacgcgctggatctgcagtttctgtgggaatgcgcgccgcaggaagaattcgacgcg
gccgccctggcggccgattatttcgggcacgcgcccagcgcggtggaacaggctgcgctg
ctgatgcgcctgcacggcgcgccggcgtacttccaccggcgcggcaagggccgctaccgg
ccggcgccgccggacatcctggccgcggccctggcggcgctggaaaaaaagcagaagcag
gccgaacagcagcagcagtgggtcgacgagatggcggcgggccgcctgcccggcgagatc
gcccaggcggccgaatcgctgctgattcgccccgacaagaacagcatgcaatggaaggcc
ctggacgccgcctgcgcgcggcagcagaaaagccccgaccgcctgctgctggagctgggc
gcctggccgcacccgctggctctgcataagcgacgcttcctggccacctactttccgcgc
ggcaccgggtttccggatgccgccatcccgccgctggcgcgcgacctgccgctggccgat
gccgaactgtattcggtggacgacatcaccaccaccgaaatcgacgacgccctgtcggtt
acccccctgcccgacggcaaggtgcgggtcggcatccatgtggccgcgccgggcctggcc
gtgacgcgcggcagcgagctcgacaagctggcgcgggcgcgcctgtctaccgtgtacatg
cccggcgagaaaattcccatgcagcccgaccacgtcatccaggcgttctcgctggatgcg
ggccgcgaggtgccggcgctctcgctgtacgtgacggccgaccccgccacgggcgaaatc
tcggcgacggaaacgcgggtcgagcgcgtggtggtgcgcgagaacctgcgccacaacgaa
ctcgacgggcaggtcaccgaagccgccctgaacgatccggacgcgccgctgccgtacggg
cactggctgcggccgctgtggcggctggccagcgcgctgtcggcgcagcgcgacatcgtg
cgcggcaagcccgagaacaattcgcgggtggaatacagcttttacctggatggcgacccg
gacaaccccgacacgccggtgcggctggtgccgcgccagcgcaatgcgccgctggaccgc
atggtggccgagtacatgatcctggccaacaatgtgtggggcggcctgttgcatcagcac
ggcgtgccgggcatctatcgctcgcagcaggccgggcgcgtgcgcatgagcacccaggcc
ctgccgcacgaggccatcggcgtgccccaatatgcctggagcacgtcgccgctgcgccgc
tatgtggacctggtcaaccagtggcagttgattgcggcggtcgagcatggcgtgtcggcc
cgcctggtggccccgttcaagccacgcgacgccgatctgttcgccatcatcggcgccttc
gacgcgcaatacgccgcctggaacgagttccagggcaatatggaacgctactggtgcctg
cgctggctgcagcagcagggcatcacccgcaccgtggcgcatgtactgcgcgaagacctg
gtgcggctggcgaacgcgccgctggtcatgcgggtgggcggcctgcccgagctggaacgc
ggcatggccgtggaactggacatcctgggcatggatgaactgacgctcgaggtggattgc
cggtatgtgggggtagtggggggggcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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