KEGG   Bacillus pumilus SAFR-032: BPUM_1569
Entry
BPUM_1569         CDS       T00599                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
bpu  Bacillus pumilus SAFR-032
Brite
KEGG Orthology (KO) [BR:bpu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bpu03016]
    BPUM_1569 (truB)
Enzymes [BR:bpu01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     BPUM_1569 (truB)
Transfer RNA biogenesis [BR:bpu03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BPUM_1569 (truB)
 Prokaryotic type
    BPUM_1569 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB_C PseudoU_synth_2
Other DBs
NCBI-ProteinID: ABV62251
UniProt: A8FDD4
Position
1624124..1625053
AA seq 309 aa
MINGVLLLHKERGMTSHDCVFKVRKILHTKKVGHTGTLDPEVSGVLPICIGRATKIVEYL
TDKSKTYDAEITIGFSTTTEDQTGEIVEEKKVQNPISEEEIDAALKQFQGTIEQIPPMFS
AVKIGGKKLYEYAREGIEIERPSREISIHRIERTTPALFENGTVSFRFTVLCSKGTYVRT
LAVDIGKKLGFPAHMSHLIRTGSGDFTLDECITLDELRDISEEGTVDEHLVPIERALNHL
PKWEINDTLASKVENGAVLPMPDEFAHFAEEDRVAVFAPSGRCMAIYMKHPTKQNLMKPA
KILSQDKQS
NT seq 930 nt   +upstreamnt  +downstreamnt
atgataaatggtgttcttttattacataaagaaagagggatgacctctcacgactgtgtg
ttcaaagtgagaaagatattgcatacaaaaaaagtgggacatacaggtacactcgatccc
gaggtatcaggtgttctgcctatttgtatcgggagagcaacgaagattgtcgaatattta
acagataaatcgaaaacgtatgatgcagaaatcacgattggtttttctacaacaacagaa
gaccaaacaggtgaaatcgtagaagaaaaaaaggtgcaaaaccccatctcagaagaagaa
attgatgctgcgttgaaacagtttcaaggaaccattgaacaaattccacctatgttttcg
gcagtgaaaattggcggaaaaaaactctatgaatatgcaagagaaggcattgaaattgag
cgaccgagccgtgaaatttcgattcaccgtatcgagcggacaacacctgctttatttgaa
aatggaacagtatcatttagatttaccgttttatgttcaaaaggaacgtatgtcagaacc
ttagcggttgatattggaaagaaactaggttttccagctcatatgtcacacctcattcgc
actggttcaggtgattttacactagatgagtgcatcacccttgatgagctgcgagatata
agcgaagaaggcacagtagatgagcaccttgtcccgatcgagcgtgcgctcaatcatttg
ccgaaatgggagataaatgatacattagcaagtaaagtggaaaacggtgcagtcctgcca
atgcctgatgaattcgctcatttcgcagaggaagatcgtgtcgctgtctttgctccttca
ggccggtgtatggcgatatatatgaagcacccgaccaaacagaatttgatgaagccggcg
aagatcttatctcaggacaagcaatcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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