KEGG   Bacillus pumilus SAFR-032: BPUM_1625
Entry
BPUM_1625         CDS       T00599                                 
Name
(GenBank) RNA-binding protein
  KO
K03666  host factor-I protein
Organism
bpu  Bacillus pumilus SAFR-032
Pathway
bpu02024  Quorum sensing
bpu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bpu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BPUM_1625
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BPUM_1625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bpu03019]
    BPUM_1625
   03036 Chromosome and associated proteins [BR:bpu03036]
    BPUM_1625
Messenger RNA biogenesis [BR:bpu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     BPUM_1625
Chromosome and associated proteins [BR:bpu03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    BPUM_1625
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: ABV62307
UniProt: A8FDJ0
Position
1688637..1688858
AA seq 73 aa
MKPINIQDQFLNQIRKDNTFVTVFLLNGFQLRGQVKGFDNFTVLLETEGKQQLIYKHAIS
TFAPQKNVNLELE
NT seq 222 nt   +upstreamnt  +downstreamnt
atgaaaccgattaatattcaggaccaatttttgaatcaaatccgcaaagacaatacattt
gtcacagtattcttactgaatggctttcagcttcgcggtcaagtgaaaggatttgacaat
ttcacggtgctgcttgaaacagaagggaagcagcagcttatttataaacacgccatttct
acatttgctcctcaaaagaatgtaaatctagaattagaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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