KEGG   Paraburkholderia phenoliruptrix: BUPH_01962
Entry
BUPH_01962        CDS       T02300                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
bpx  Paraburkholderia phenoliruptrix
Brite
KEGG Orthology (KO) [BR:bpx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:bpx03016]
    BUPH_01962
Enzymes [BR:bpx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     BUPH_01962
Transfer RNA biogenesis [BR:bpx03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    BUPH_01962
SSDB
Motif
Pfam: 2_5_RNA_ligase2 LigT_PEase
Other DBs
NCBI-ProteinID: AFT85533
UniProt: K0DNR0
Position
1:1668755..1669315
AA seq 186 aa
MFFAVFPDSNTAADISKLAQRLCGEARARGRPLAASRLHVTLRHLGTFAGGLPPAHVEAA
MQAAASIRMAPFTVEFDTVASFASKPRPGPLVLTGTDGVVGLHTLHDALHDAFYDALRDC
GIESGRGAAAGVFTPHVTLAYGLPWAAAQPVEPVCWNVRAFALIHSLLGRTRHVVLARWP
LEGVTP
NT seq 561 nt   +upstreamnt  +downstreamnt
ttgtttttcgcggtctttccggacagcaacacggcggccgatatttcaaagctcgcgcag
cggctttgtggggaagcgcgcgcccgcggcaggccgctcgcggccagtcgtctgcatgtc
acgctgcggcatctcggcactttcgcgggcgggctgccgccggctcatgttgaggcggca
atgcaggccgcggcgtctatccgcatggcgccgtttaccgtggagttcgacacggtcgcg
agtttcgcttccaaaccgcgcccgggcccgctggttctgacgggaaccgatggcgtcgtc
ggtcttcatactctgcatgacgcgttgcatgacgcgttctacgacgcattgcgggactgc
ggcattgagagtggcaggggggccgcggcgggggtttttacgccgcatgtgacgttggct
tacggtctgccctgggcggccgcccagccggtcgagccggtttgctggaacgtgcgcgct
tttgcgctgatacacagcttgttggggcggacccggcatgttgtgcttgcgcgctggccg
ctcgaaggcgtcacgccctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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