KEGG   Paraburkholderia phytofirmans PsJN: Bphyt_5454
Entry
Bphyt_5454        CDS       T00765                                 
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
  KO
K14051  c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
Organism
bpy  Paraburkholderia phytofirmans PsJN
Pathway
bpy02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:bpy00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Bphyt_5454
Enzymes [BR:bpy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.52  cyclic-guanylate-specific phosphodiesterase
     Bphyt_5454
SSDB
Motif
Pfam: EAL GGDEF PAS_9 PAS_4 PAS PAS_8 GGDEF_2 PAS_3
Other DBs
NCBI-ProteinID: ACD19812
UniProt: B2TE11
Position
2:1655961..1658030
AA seq 689 aa
MMKTVCRLRLQGGHRHTPPGDLMNDDQHEQVLFAQFGTSSPCWRLSNDSNALELTPVTGD
VPANVAIPLNPQQASQIRCLTGVTSHLVLDVRLFGEPLRLHLVGKKLSSNSWAGTASAYD
DTESVARDLVHGLSFAEQVVSEVNSVVVIVDRHGRIQRFNRLAEELTGVKEENIVGRNVW
ALFMSTEDGAASSQNIAGFFNRGVSYEVERRVKTVHGERLFLFRNKFVQSGSGIDEQFLI
CSGTDITEERLAQERLTQLANTDSLTGLANRNAIQDKIRAAIEDAAPGEAVGVLFLDLDN
FKKVNDHYGHVFGDRLIRDVSSAISECLNEGDTLARLGGDEFIVLAAKGTAHELETTAQR
ILERMRTPFALGLVEVYTGCSIGIARYPEHGDSLESLIRSADTAMYVAKDEGKRTHRVFS
PEMNRRVAEYMWLDTNLRRGLEEGQLTLHYQPKLSLATGVVQGVEALVRWNSPERGQIMP
SEFIRYAEESGLIGVLGRWVMETAAKQAAKWKADGYNLRIAINVSARQLVDTAVVRHFSE
ALQNARLDPCLIDLELTESCLIEDETAAIDLIRQFRQLGAQVHLDDFGTGYSSLSQLGRI
PLDVIKLDRSFVRSINADTKAQALVRSMVAVAQELNFKVVAEGIETESEEVFMKGLGVDY
VQGFLYGQAMPAAEFERWLQDRQKLRLIA
NT seq 2070 nt   +upstreamnt  +downstreamnt
atgatgaagactgtttgccgactccgcctgcaaggcggccaccggcacacaccgcccggg
gacctcatgaacgacgaccaacacgagcaggtgctatttgcccagttcggcacaagcagt
ccatgctggcgtctgtcgaacgacagcaacgcgctcgaactcacgcccgtcactggcgac
gtgccggctaatgtcgccattccgctgaatcctcagcaggcttcgcaaatccgctgcctc
actggcgtgacctcgcacctcgtgctcgacgtgcggctgttcggcgaaccgttgcgtttg
catctggtcggtaagaagctcagcagcaacagctgggccggcaccgcatcggcctacgac
gacaccgaatccgtcgcccgcgatctggtccacggcctctcgtttgccgaacaagtggtg
tccgaagtgaattcggtcgtcgtgatcgtcgaccggcatggtcgaatacagcgcttcaac
cgtcttgccgaggaactcacgggcgtcaaggaagagaacatcgtcggccgcaacgtctgg
gcgttgttcatgtccaccgaagacggcgcagcctccagccagaacattgcgggcttcttc
aatcgcggcgtgtcgtacgaagtcgagcggcgcgtcaagacagtgcatggcgagcggctc
tttttgttccgcaataagttcgtgcagagcggcagcggcatcgacgaacaattcctgatc
tgctccggcaccgacatcaccgaggaacggctcgcgcaggaacgcctcacccaactggcg
aacaccgactcgctcaccggcctcgcgaatcgcaacgcgatccaggacaagatccgcgcc
gccatcgaagacgccgcgccgggcgaagccgtcggcgtgctgttcctcgacctcgacaac
ttcaagaaggtcaacgaccactacggccatgtcttcggcgaccgcctgatccgcgatgtc
tcgtcggcgatcagcgagtgtctgaatgaaggcgatacgctcgcgcggctcggtggcgac
gaattcatcgtgctcgccgccaagggcacggcgcacgaactcgaaaccaccgcgcagcgc
attctcgaacgcatgcgcacgccgttcgccctcgggctcgtggaggtctacaccggctgc
tcgatcggcatcgcgcggtatccggaacacggcgacagtctcgaatcgctgatccgttcg
gccgacacggccatgtacgtcgccaaagacgaaggcaagcgcacgcaccgcgtgttctcg
ccggaaatgaaccgtcgcgtcgccgagtacatgtggctcgacaccaacttgcggcgcggg
ctcgaagaaggccagctgacgctgcactaccagccgaaactgtcgctcgccaccggcgtg
gtgcaaggcgtcgaagcgctggtgcgctggaattcgccggagcgcgggcagatcatgccg
agcgagttcatccgttacgcggaagagtccgggctgatcggcgtgctgggccgctgggtc
atggaaacggccgcgaaacaggccgccaaatggaaggcggacggctacaacctgcgcatc
gcgatcaacgtgtcggcgcggcaactggtcgatacggcggtcgtccgccatttcagcgag
gcgctgcagaacgccaggctcgacccctgcctgatcgatctcgaactgaccgagagttgc
ctgatcgaagacgaaacggcggcgatcgatctgatcaggcagttccgccagctcggcgcg
caggttcatctggacgatttcggcacggggtattcgtcgctctcgcagctcggccggatt
ccgctcgacgtcatcaagctcgaccgcagcttcgtgcgctcgatcaacgccgacaccaaa
gcgcaggcactggtgcgctccatggtggccgtcgcgcaggaattgaatttcaaggtggtc
gccgaagggatcgagaccgagtcggaagaagtgttcatgaagggcctgggagtggattac
gtgcagggcttcctgtacggtcaggccatgccggcggctgaatttgaacgctggctgcag
gatagacagaagctcaggctgattgcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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