KEGG   Bacillus amyloliquefaciens LL3: LL3_02852
Entry
LL3_02852         CDS       T01835                                 
Symbol
recJ
Name
(GenBank) putative single-strand DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bql  Bacillus amyloliquefaciens LL3
Pathway
bql03410  Base excision repair
bql03430  Mismatch repair
bql03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bql00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LL3_02852 (recJ)
   03430 Mismatch repair
    LL3_02852 (recJ)
   03440 Homologous recombination
    LL3_02852 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bql03400]
    LL3_02852 (recJ)
DNA repair and recombination proteins [BR:bql03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     LL3_02852 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     LL3_02852 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      LL3_02852 (recJ)
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1 PGM_PMM_II tRNA_anti-codon
Other DBs
NCBI-ProteinID: AEB64384
Position
complement(2669889..2672246)
AA seq 785 aa
MLASKMRWEIQQPDKEKVKSLTEQLDITPLVASLLVKRGFDTAESARLFLHTKDADFYDP
YELKGMREAVDRIKLAVSRGEPIMIYGDYDADGVTSTSVMQTALRQLSANVDFYIPDRFT
EGYGPNEQAFRSIKERGFSLIITVDTGIAAVHEAEVAKELGLDVIITDHHEPGPELPDVF
AIIHPKQPGCSYPFKELAGVGVAFKLAHALTGSLPEAMLDLAAIGTVADLVPLHDENRLI
ASLGIERLRTTNRPGLKALIKLSGGDIGQADEETIGFQVAPRLNAVGRIEQADPAVHLLM
TDDQFEAEELASDIDRLNKERQKMVKTMTEEAVEMVQQQGGNPSAIVVAKAGWNPGVVGI
VASKLAERFYRPAVVLGMDEEQGIAKGSARSIRGFNLFTSLSQCRDILPHFGGHPMAAGM
TLKAEDVADLRDRLNQMAEETLTEEDFIPVQEVDLVCGVEDITVESITELNMLSPFGMLN
PKPHVMVENAVLDEVRLIGANKNHVKMTVKNDSAALDCVGFNKGELEAGIVPGSTISIVG
EMSINEWNNRKKPQLMIKDAAVPEWQLFDIRGKRMWEDTVTALPKEKRVLISFNEKTARK
LRAELSGELAEITSESEAEALPLDGKYAVFLDVPPSADRLQRLLDGKKPERIYFVFINHE
EHFLSSFPSRNDFKWFYAFLLKRGTFNLGKHGSELARHRGWSIDTINFMTKVFFDLGFVK
IEDGVLSVVSGAKKRDLADSQTYQVKQQLMELDQKLNYSAAHELKEWLNKLMNQGSEAYE
STRRT
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgttagcgtcaaaaatgcgctgggaaatccagcagccggataaggaaaaggtcaaatca
ctcacagaacaattggacataacacctcttgtggcatcgctgcttgtaaaaagaggtttt
gatactgccgaaagtgcaaggctgtttttacatacaaaggatgcagacttttatgacccg
tatgaattaaagggaatgcgggaagcagttgatcggataaagctggcggtttcccgcggg
gaaccgattatgatttacggagattacgatgcagacggcgttacaagcacgtcagtgatg
cagacggcgctcagacagctgtcagcgaacgttgacttttatattcccgaccgtttcaca
gaaggctacggcccgaatgaacaagctttccgctccataaaagagcggggattttcgctc
atcattacagtggatacgggtatcgccgccgttcatgaagccgaagtcgcaaaagagctc
ggtttagacgtcattattaccgaccaccatgagccgggacccgagcttcctgacgtattt
gcgattatccacccgaagcagccgggctgcagctatccgtttaaagaattggccggcgtc
ggtgtggcgtttaagcttgcccacgcgcttacgggttctttgccggaagctatgctggac
ttggcggcgatcggtacggttgctgatctggtgccgctgcatgatgaaaacagattaata
gcgtcgcttggaatcgaaaggcttcggacgacaaatcggccgggtctcaaagctctgatt
aagctttccggcggagatatcggacaagccgatgaggaaacgatcgggtttcaggtcgca
ccgaggctgaatgccgtcggaagaatagaacaggctgatcccgcggtgcacctgttgatg
accgatgaccagtttgaagcggaggagctggcttcggatattgaccggctgaataaagag
cggcagaaaatggtgaaaaccatgaccgaagaggctgttgaaatggttcagcagcaaggc
ggaaacccttctgccattgtcgtggcaaaagccggctggaatccgggagttgtcggtatt
gtcgcatcgaagctggctgaacgcttttaccggcccgctgttgtgctggggatggatgag
gagcagggaatcgccaaagggtcggcgcgaagcatcagaggctttaacctttttacgagc
ctgtcacagtgcagagacattcttcctcatttcggcggacatccgatggccgcaggaatg
actttgaaggctgaagatgtggcggatttaagggatcggctgaatcaaatggctgaagaa
acccttaccgaagaggattttatccccgttcaggaggttgatcttgtctgcggcgtcgaa
gacatcaccgttgaaagcattacagaattgaatatgctgtcgccgttcggcatgctaaac
cctaaacctcatgtgatggtggaaaacgccgtgcttgatgaggtgcgcctgatcggagca
aataaaaatcacgtgaaaatgacggtgaaaaatgattccgccgctctcgactgcgtcggc
tttaacaaaggagagcttgaagccgggattgttcccggatcaacgatttccattgtcggc
gagatgtctattaatgaatggaacaacagaaagaaaccccagctgatgattaaagatgct
gcggtgccggaatggcagctttttgatatcaggggcaagcggatgtgggaagatacggtc
actgcgctgcctaaggaaaaacgggtgctcatcagctttaacgaaaaaaccgcccgaaag
ctccgtgccgagctttcgggtgagctggctgagatcacgtcggaatccgaagcagaagct
cttccgcttgacggaaagtatgccgtttttctggatgtgccgccatcagcggaccgcctc
cagcgtttgcttgacgggaagaagccggaacggatttattttgtttttattaatcatgaa
gaacatttcctgtcctcatttccatcgcggaatgacttcaagtggttttacgcatttctc
ttgaaaaggggcacttttaacttaggcaagcatggttcagagcttgcgagacacagagga
tggtcaattgacacaatcaatttcatgacaaaggtgttttttgatctcggttttgttaaa
atagaagatggtgtgctgtctgtcgtgagcggcgcgaaaaaacgcgacctcgcagattcg
caaacctatcaggtaaaacagcagctgatggaattagaccagaagctcaattattccgca
gcccatgagctgaaggaatggctgaataagctgatgaaccaaggttcagaggcttatgaa
agtacgaggaggacatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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