KEGG   Bartonella quintana RM-11: RM11_0105
Entry
RM11_0105         CDS       T02294                                 
Name
(GenBank) DNA polymerase III subunit beta
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
bqr  Bartonella quintana RM-11
Pathway
bqr03030  DNA replication
bqr03430  Mismatch repair
bqr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:bqr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RM11_0105
   03430 Mismatch repair
    RM11_0105
   03440 Homologous recombination
    RM11_0105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bqr03032]
    RM11_0105
   03400 DNA repair and recombination proteins [BR:bqr03400]
    RM11_0105
Enzymes [BR:bqr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RM11_0105
DNA replication proteins [BR:bqr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RM11_0105
DNA repair and recombination proteins [BR:bqr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RM11_0105
SSDB
Motif
Pfam: DNA_pol3_beta_2 DNA_pol3_beta DNA_pol3_beta_3
Other DBs
NCBI-GeneID: 13564231
NCBI-ProteinID: AFR25851
Position
146077..147210
AA seq 377 aa
MGIFMHVTVDRNQLLKSLGRVHRVVERRNTVPILSNVLIDADKNGVQLKATDLDLEVTES
FMANVKQAGAITVPAHLLYDIVRKLLDGSEIVLSVDMNQASTMSVVSGCAHFQLQCLPKV
DFPESLPGQFGYRFSLSASSLKHLLDCTQFAISTEETRYYLNGIYFHVVDDGVLKLRLVA
TDGHRLAQVDVEAPSGVKDMPGIIIPRKAVGELQKLLSEEINDNVCVELSETKIRFSVGS
VVFTSKLIDGTFPEYQRVIPLGNDKKLIVNKQNFSSAVDRVSTISSDRGRAVKLTIEQGQ
LKLVVHNPDSGSAEDQLAATYTSDPLEIGFNSRYLLDIAGQLSGDEMVFMLAEAGAPALI
RDNDDADALYVLMPIRV
NT seq 1134 nt   +upstreamnt  +downstreamnt
atggggatttttatgcacgttacagttgatcgcaatcaacttctcaagtctcttggtcgt
gttcaccgtgtggttgagcgtcgtaatactgttcctattttgtcgaatgtgttgattgat
gcagacaagaacggtgtgcaattaaaagcaacagaccttgatttagaggttacagaatct
tttatggccaatgtaaaacaagcgggagcaataactgttccagcacatttgctgtatgac
atagttcgtaaacttcttgatgggagtgagattgtattatcagttgatatgaatcaggcg
agtacgatgtccgttgtttctggttgtgcacattttcagcttcagtgtcttcccaaagta
gattttccagagtcgcttccaggtcaatttggttaccgtttttctttatcggcatcaagc
ttgaagcatttgcttgattgtacgcaattcgctatttctactgaagagactcgttattat
cttaatggtatttattttcatgtcgttgatgatggtgttctaaagctgcgtttagttgct
actgatggtcatcgtttggcgcaagttgatgtggaagcgccttcgggggttaaagacatg
cctggtatcattattccccgtaaagctgtaggagagttgcaaaagcttctttctgaagaa
attaatgataatgtgtgtgtagagctttcagaaacaaaaattcgtttttctgtaggttct
gtggtttttacatctaagttaatcgatggaacattcccagaatatcaacgtgttatccct
cttggaaatgataaaaaattaatcgtcaacaagcagaatttttcttctgccgttgatcgt
gtttctacaatttcaagtgatcgcgggcgtgcagtgaagttaacgattgagcagggacaa
ttaaagcttgttgttcataaccctgactcggggagtgcagaagatcaattagcagctact
tacacatctgatccactcgagatagggtttaattcacgttatcttttggatattgctgga
caactttcgggcgatgagatggtttttatgctggccgaagccggagcccctgctctgatt
cgtgataatgatgacgcggatgcgctttacgtgctgatgcccatccgcgtttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system