KEGG   Bradyrhizobium sp. ORS 278: BRADO0094
Entry
BRADO0094         CDS       T00516                                 
Symbol
ihfB
Name
(GenBank) Integration host factor beta-subunit (IHF-beta)
  KO
K05788  integration host factor subunit beta
Organism
bra  Bradyrhizobium sp. ORS 278
Brite
KEGG Orthology (KO) [BR:bra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bra03032]
    BRADO0094 (ihfB)
   03036 Chromosome and associated proteins [BR:bra03036]
    BRADO0094 (ihfB)
   03400 DNA repair and recombination proteins [BR:bra03400]
    BRADO0094 (ihfB)
DNA replication proteins [BR:bra03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BRADO0094 (ihfB)
Chromosome and associated proteins [BR:bra03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    BRADO0094 (ihfB)
DNA repair and recombination proteins [BR:bra03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      BRADO0094 (ihfB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_bac_1 HU-CCDC81_bac_2 HU-CCDC81_euk_2 XPC-binding HU-DNA_bdg
Other DBs
NCBI-ProteinID: CAL74065
RhizoBase: BRADO0094
UniProt: A4YJI9
Position
complement(109930..110247)
AA seq 105 aa
MIKSELVQRIAEHNPHLYQRDVENIVNAILDEIVAALARGDRVELRGFGAFSVKHRPARA
GRNPRTGAHVPVDQKSVPFFKTGKEMRERLNRDNPEGAAADDADD
NT seq 318 nt   +upstreamnt  +downstreamnt
atgatcaaatccgagcttgttcagcgtatcgccgagcacaacccgcacctctaccagcgg
gatgtcgagaacatcgtcaacgcgatcctcgatgagatcgtcgccgcgctcgcgcggggt
gatcgcgtcgagctgcgtggcttcggcgctttttccgtcaagcaccggcccgctcgggcc
gggcgcaatccgcggacgggcgctcatgtcccggtggatcagaagagcgtgccgttcttc
aagaccggcaaggaaatgcgagagcggctgaaccgggataatcccgagggtgcagctgcc
gacgacgcggacgattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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