KEGG   Bradyrhizobium sp. BF49: BF49_6466
Entry
BF49_6466         CDS       T04337                                 
Name
(GenBank) DNA topoisomerase I EC 59912
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
brad  Bradyrhizobium sp. BF49
Brite
KEGG Orthology (KO) [BR:brad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:brad03032]
    BF49_6466
   03400 DNA repair and recombination proteins [BR:brad03400]
    BF49_6466
Enzymes [BR:brad01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BF49_6466
DNA replication proteins [BR:brad03032]
 Prokaryotic type
  DNA Topoisomerases
   BF49_6466
DNA repair and recombination proteins [BR:brad03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BF49_6466
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim zf-C4_Topoisom Milton Toprim_4
Other DBs
NCBI-ProteinID: CUT15386
Position
I:complement(6596652..6599411)
AA seq 919 aa
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDANFKMIWEVDPKAAG
RLNDIAKSLKNADRLILATDPDREGEAISWHVLEVLKEKRAIKDHKIERVVFNAITKQAV
TDAMKHPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVAREYWSLIATLLTPRGDAFEARLVGADGKKIQRLDIGTGAEAEDFKKALEAA
AYAVTAVDAKPARRNPQAPFTTSTLQQEASRKYGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIDPSAITQARKVIGEDYGNAYVPDAPRQYQAKAKNAQEAHEAIRPTDMSR
RPDSMSRKLESDQARLYELIWKRTIASQMESAELERTTVDITAKVGGRTLDLRATGQVVK
FDGFLALYQEGRDDEEDEDSRRLPAMSPNDALKRQSLAVTQHFTEPPPRFSEASLVKRME
ELGIGRPSTYASILQVLKDRGYVKLEKKRLHGEDKGRVVVAFLESFFARYVEYDFTANLE
EQLDRISNNEISWQQVLKDFWTGFIGAVDEIKDLRVAQVLDVLDDMLGQHIYPARTDGGD
IRQCPSCGNGRLNLKAGKFGAFVGCSNYPECRYTRQLAADGEATADRSLGQDPDTGRDVW
VKAGRFGPYIQLGEQKDYAEGEKPKRAGIPKGTSPGDVELELALKLLSLPREIGKHPETG
EPITAGLGRFGPFVKHEKTYASLEAGDEVFDIGINRAVTLIAEKIAKGPSRRFGADPGKA
IGDHPTLGTVTVKGGRYGAYVTAGGVNATIPSDIEKDAITLPQAIALIDERAAKGGGKKP
KKAAKPAKAKKAAAKAADGDDAAPKIKKPAAKKAAKPKSESTSKARAAVSSTAKTSAIKT
SPTKAAGAKAPAKKSAGTK
NT seq 2760 nt   +upstreamnt  +downstreamnt
atgaatatcgtcattgtggagtcgccggcgaaagccaagacgatcaacaagtatttgggc
tcgtcctacgaggttctggcctcgtttggccatgtccgcgacttgcccgcgaagaacggc
tccgtcgatcccgacgccaatttcaagatgatctgggaagtcgaccccaaggcggccggc
cggctcaacgacatcgccaagtccctcaagaacgccgatcgcctgattctcgcaaccgac
cctgatcgcgagggcgaggccatctcctggcacgtgctggaggtcctgaaagagaagcgt
gcgatcaaggaccacaagatcgagcgcgtggtgttcaacgccatcaccaagcaggcggtc
acggacgccatgaagcatccgcgccagatcgacggtgcgctggtcgacgcctatatggcg
cggcgcgcgctggactatctggtcggcttcaccctctcccccgtgctgtggcgcaagctg
ccgggcgcccgctcggccggccgcgtgcagtcggtggcgctgcggctggtctgcgaccgc
gagctcgagatcgaaaagttcgtcgcgcgcgaatactggtcgctgatcgcgacgctgctg
acgccgcgcggcgacgccttcgaggcccgtctcgtcggcgctgacggcaagaagatccag
cgcctcgacatcggcaccggcgcggaagccgaggacttcaagaaggcgctggaagcagcc
gcctacgctgtgaccgcggtcgatgccaagccggcccggcgcaatccgcaggcgcccttc
acgacctcgacgctgcagcaggaagccagccgcaaatatggctttgcgccggcgcacacc
atgcgcatcgcgcagcggctctatgaaggcatcgacatcggcggcgagaccaccggactc
attacttatatgcgtaccgacggcgtgcagatcgatccgtccgcgatcacccaggcacgc
aaggtgatcggcgaggattacggcaacgcctatgtgccggacgcgccgcgccagtaccag
gccaaggccaagaacgcccaggaagcccacgaagcgatccggccgaccgacatgtcgcgc
cgccccgacagcatgagccgcaagctcgaatccgaccaggcgagactatatgaactgatc
tggaagcgcaccatcgcgagccagatggaatcggccgagctggaacgcaccacggtcgac
atcacggcgaaggtcggcggccgcacgctggacctgcgcgccaccggccaggtcgtcaag
ttcgacggcttcctcgcactttatcaggaaggccgcgacgacgaggaggacgaggactcc
cgccgcctgcccgcgatgagccccaacgacgcgctgaagcggcagtcgctcgccgtcacc
cagcacttcaccgagccgccgccacgcttctccgaggcctcgctggtcaagcgcatggaa
gagctcggcatcggccggccctcgacctatgcctcgatcctccaggtcctcaaggaccgc
ggctacgtcaagctcgagaagaagcgcctgcacggcgaggacaagggccgcgtcgtggtc
gcgttcctcgaaagcttctttgcccgctacgtcgaatacgacttcaccgccaatctggaa
gagcagctcgaccgcatctccaacaacgagatctcctggcagcaggtgctgaaggatttc
tggaccggcttcatcggcgccgtcgacgagatcaaggatctgcgcgtggcgcaggtgctc
gacgtgctcgacgacatgctgggacagcacatctatccggcgcgcaccgacggcggcgac
atcaggcaatgtccgagctgcggcaacggacggctcaatctcaaagccggcaagttcggc
gccttcgtcggctgctcgaactatccggaatgccgctacacccgtcagctcgccgccgac
ggcgaggcaacggctgatcgttcgctcggccaggaccctgatacgggtcgcgatgtctgg
gtcaaggccggccggttcggcccctacatccagctcggcgagcagaaggattatgcggag
ggcgagaagcccaagcgcgcgggcattcccaaggggacgtcccctggagatgtcgagctc
gagcttgcgctcaagctgctgtcgctgccgcgcgagatcggcaagcatccggaaaccggt
gagcccatcaccgcaggcctcggccgcttcgggccgttcgtgaagcacgagaagacctat
gccagcctcgaggccggcgacgaagtgttcgacatcggcatcaaccgcgcggtgaccctg
atcgcggagaagatcgccaagggcccgagccgccgcttcggcgccgatcccggcaaggcg
atcggcgatcatcccaccctcggcaccgtcacggtgaagggcggccgctacggcgcctat
gtcacggcgggcggcgtcaacgcgacgatcccgagcgacatcgagaaagacgccatcacg
ctgccgcaggcgatcgcgctgatcgacgagcgcgcggccaagggcggcggcaagaagccg
aagaaggcggctaagccggccaaggccaagaaggctgcggcgaaggccgccgacggcgat
gacgccgcgccaaaaatcaaaaagccggccgcgaagaaggcggccaaacccaaatccgaa
tccaccagcaaggcgcgcgccgccgtgtcgtcgacggccaagacttcggccatcaagact
tcgccgaccaaggcagctggcgccaaagctccggccaagaagagtgccggcaccaaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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