KEGG T04273: BCCGELA001

Bradyrhizobium sp. CCGE-LA001: BCCGELA001_16160

Entry

BCCGELA001_16160  CDS       T04273

Name

(GenBank) ribonuclease Z

K00784

ribonuclease Z [EC:3.1.26.11]

Organism

brc Bradyrhizobium sp. CCGE-LA001

Brite

KEGG Orthology (KO) [BR:brc00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:brc03016]
    BCCGELA001_16160
Enzymes [BR:brc01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     BCCGELA001_16160
Transfer RNA biogenesis [BR:brc03016]
Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BCCGELA001_16160
Prokaryotic type
    BCCGELA001_16160

SSDB

Motif

Pfam:

Lactamase_B_2 Lactamase_B Lactamase_B_4 Lactamase_B_3 DAGK_cat PDEase_II

Other DBs

NCBI-ProteinID:

AMA57645

UniProt:

A0A0X8CHT6

Position

3536258..3537160

AA seq 300 aa
MFALTFLGTSASVPSVERNHPALLVEAAGKRILVDCGEGTQRQLLRSGAGFRRLDRILLT
HAHLDHVLGIPGLFSTLGLRRTADTMIVHGGQGTLDLVISMLAGLWGAGRAPIAVAFAPL
TEGQVIDAGDFTIDCFPVRHRDTDSFGFAFRSPARRHLFPDRLAALGVPDGPLRGELAAG
RPVVIGDRTINPEEVLGPPSDGSKFVVIGDTETTEGLAQYAADADLLVIEATFLDRDAST
ARDYGHLTARDAAVFAAANNIGQLVLTHQSGRYEDDEVLAEAAAIFPNTRIAADFDRIVV

NT seq 903 nt +upstreamnt +downstreamnt
atgttcgccctgacatttctcggaacctcggccagcgttccctcggtggagcgcaaccat
ccggcgctgctcgtggaggccgcgggcaagcgtatccttgtcgattgcggcgagggcacc
cagcgccagctgctgcgcagtggcgccggcttccggaggctcgaccgcatcctgctgacg
catgctcatctcgaccacgtgctcggcatccccggcctcttctcgacgctcggcttgcgc
cggaccgccgacacgatgatcgtccatggagggcagggcacgctcgacctcgtcatcagc
atgctcgcgggcctgtggggtgcgggcagggcgccgatcgcagtcgcgttcgcgccgctg
acggaaggacaggtcatcgacgccggcgacttcaccatcgactgctttccggtccgccat
cgcgacaccgacagttttggcttcgccttcaggagtcccgcgcgccgccatctttttccc
gatcgcctcgcagcactcggcgttcccgacggtcccttgcgcggagaattggctgccgga
cgaccggtcgtgatcggtgatcgaacgatcaacccggaagaggtcctggggccaccgagc
gacggcagcaagttcgtcgtgatcggcgacaccgagaccaccgagggtctggcacaatat
gcggctgacgctgatttgctggtgatcgaggcgaccttcctcgatcgcgacgcctcgacc
gcgcgcgactacggccacctcactgcgcgcgatgcagccgtctttgccgcggcaaacaat
atcggccagctcgtgctcacgcatcagtcgggccgctatgaggacgacgaggtccttgcg
gaagcagccgcgatctttccgaacacccggatcgcggccgacttcgatcgcatcgtcgtc
tag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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