KEGG   Bradyrhizobium sp. CCGE-LA001: BCCGELA001_21685
Entry
BCCGELA001_21685  CDS       T04273                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
brc  Bradyrhizobium sp. CCGE-LA001
Brite
KEGG Orthology (KO) [BR:brc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:brc03032]
    BCCGELA001_21685
   03400 DNA repair and recombination proteins [BR:brc03400]
    BCCGELA001_21685
Enzymes [BR:brc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     BCCGELA001_21685
DNA replication proteins [BR:brc03032]
 Prokaryotic type
  DNA Topoisomerases
   BCCGELA001_21685
DNA repair and recombination proteins [BR:brc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BCCGELA001_21685
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim zf-C4_Topoisom Toprim_4
Other DBs
NCBI-ProteinID: AMA58620
UniProt: A0A0X8CJF4
Position
4686013..4688751
AA seq 912 aa
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDANFKMIWEVDPKAAG
RLNDIAKSLKGADRLILATDPDREGEAISWHVLEVMKEKRALKDQKIERVVFNAITKQAV
TDAMKHPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVPREYWSLVATLLTPRGDAFEARLVGADGKKIQRLDIGTGAEAEDFKKALEAA
AYAVTAVDAKPARRNPQAPFTTSTLQQEASRKYGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIAPEAITQARKVIGEDYGNAYVPDAPRQYQAKAKNAQEAHEAIRPTDMSR
RPDSISRKLDADQAKLYELIWKRTIASQMEAAELERTTVDITAKAGGRTLELRATGQVIK
FDGFLALYQEGRDDEEDEDSRRLPGMSAGEALKRQSLAVTQHFTEPPPRFSEASLVKRME
ELGIGRPSTYASILQVLKDRGYVKLEKKRLHGEDKGRVVVAFLESFFSRYVEYDFTAGLE
EQLDRISNNEISWQQVLKDFWRDFIGAVDDIKDLRVAQVLDVLDEMLGPHIYPPRADGGD
VRQCPNCGTGRLNLKAGKFGAFVGCSNYPECRYTRQLAADGETTADRSLGQDPETGRDVW
VKAGRFGPYIQLGEQKDYEEGEKPKRAGIPKGTSPSDVDLELALKLLSLPREIGKHPETG
QPITAGLGRFGPFVKHEKTYASLEAGDEVFDIGLNRAVTLIAEKVAKGPSRRFGADPGKA
IGDHPSLGTVTVKSGRYGAYVTAGGVNATIPAEFEKDAITLPQAIALIDERAAKGGGKTK
AKKAAKPAKAKKAADGEDAAPKAKKPAAKKAAAKSKTESTSKARAAVPSTAKTSPTKSAA
TKAPAKKSAGKT
NT seq 2739 nt   +upstreamnt  +downstreamnt
atgaatatcgtcattgtggagtcgccggcgaaagccaagacgatcaacaaatatctgggc
tcgtcctacgaggtcctggcgtcgttcggccatgtccgcgacctccccgccaagaacggc
tccgtcgatcccgacgccaatttcaagatgatctgggaggtcgatcccaaagccgccggc
cggctgaacgatatcgcgaagtcgctgaaaggtgccgaccgcctgattctcgccaccgac
cccgatcgcgagggcgaggcgatctcctggcacgtgctggaggtgatgaaggagaagcgc
gcgctcaaggatcagaagatcgagcgcgtggtgtttaacgccatcaccaagcaagcggtc
acggacgcgatgaagcatccgcgccagatcgacggcgcgctggtcgacgcctacatggcg
cgacgggcgctggactatctggtcggcttcaccctctctcccgtgctgtggcgcaagctg
cccggcgcccgttcggccggccgcgtgcagtcggtcgcgctgcgcctcgtctgcgaccgc
gagctggagatcgagaagttcgtgccgcgcgaatattggtcgctggtcgcgacgctgctg
acgccgcgaggcgatgccttcgaggcccgcctcgtcggcgccgacggcaagaagatccag
cgcctcgacatcggcaccggcgcggaagccgaggacttcaagaaggcgctggaagccgcc
gcctatgccgtgaccgcggtcgatgccaagccggcgcggcgcaatccgcaggcgccgttc
accacctcgaccctccagcaggaggccagccgcaaatacggctttgcgcccgcgcacacg
atgcgcatcgcccagcgcctctatgaaggcatcgacatcggcggcgagaccaccggactc
attacttatatgcgtaccgacggcgtgcagatcgcccctgaggccatcacccaggcgcgc
aaggtgatcggcgaggactacggcaacgcctatgtgccggatgcgccgcgccagtaccag
gccaaggccaagaacgcccaggaagcgcacgaagcgatccgaccgaccgacatgtcgcgc
cgtcccgacagcataagccgcaagctcgatgccgatcaggcgaaactgtacgagctgatc
tggaagcgcaccatcgcgagccagatggaagcggccgagctcgagcgcaccacggtcgac
atcaccgccaaagccggcggccgtacgctggagctgcgcgccaccggccaggtcatcaag
ttcgacggcttcctcgcgctgtatcaggaaggccgcgacgacgaggaggacgaggattcc
cgccgcctgcccggcatgagcgccggcgaagccttgaagcggcagtcgctcgccgtcacc
cagcatttcaccgagccgccgccgcgcttctccgaggcttccctcgtcaagcggatggaa
gagctcggcatcggccggccctcgacctatgcctcgatcctgcaggtgctgaaggaccgc
ggctacgtcaagctggagaagaagcgcctgcatggcgaggacaagggccgcgtcgtggtc
gctttcctcgaaagcttcttcagccgctacgtcgaatacgacttcaccgcgggcctggag
gagcagctcgaccgcatctccaacaacgagatttcctggcagcaggtgctgaaggatttc
tggcgcgacttcatcggcgccgtcgacgacatcaaggatctgcgcgtcgcgcaggtgctg
gacgtgctcgatgagatgctggggccgcacatctatccgccccgcgccgatggcggcgac
gtcaggcaatgcccgaactgcggcactggtcggctgaacctgaaggccggcaagttcggc
gccttcgtcggctgctcgaactacccggagtgccgctacacccgccagctcgcggccgac
ggcgagacgaccgcggaccgttcgctcggccaggaccctgagacgggtcgcgatgtctgg
gtcaaggccggccgcttcggtccctatatccagctcggcgagcagaaggattacgaggaa
ggcgagaagcccaagcgcgccggcattccgaagggcacctcgcccagcgatgtcgatctc
gaactcgcgctgaagctcttgtcgctgccgcgtgagatcggcaagcatccggaaaccggt
cagccgatcaccgcaggtctcggccgcttcggaccgttcgtgaagcacgagaagacctat
gccagcctggaggctggcgacgaagtcttcgacatcggcctcaaccgtgccgtgacgctg
atcgcagagaaggttgcgaagggcccgagccgccgcttcggcgccgatcccggcaaggcg
atcggcgatcacccgagcctcggcacggtcaccgtgaagagcggtcgttatggcgcctat
gtcacggcgggcggcgtcaatgcgacgatcccggccgagttcgagaaggacgccatcacg
ctgccgcaggcgattgcgctgatcgacgagcgcgcggcgaaaggcggcggcaagaccaag
gcgaagaaggcggccaagcccgccaaggccaagaaggctgcggacggcgaggacgccgct
ccgaaggcgaagaagccggccgcgaagaaagccgcggccaaatccaaaaccgaatccacc
agtaaggcgcgcgccgccgtgccgtcgactgcaaagacgtcgccgaccaagagcgccgcc
accaaggctccggccaagaagagtgccggcaagacttga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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