KEGG   Brevundimonas sp. MF30-B: E4M01_06880
Entry
E4M01_06880       CDS       T06201                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
brf  Brevundimonas sp. MF30-B
Pathway
brf03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:brf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    E4M01_06880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:brf03021]
    E4M01_06880
   03400 DNA repair and recombination proteins [BR:brf03400]
    E4M01_06880
Enzymes [BR:brf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     E4M01_06880
Transcription machinery [BR:brf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     E4M01_06880
DNA repair and recombination proteins [BR:brf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      E4M01_06880
SSDB
Motif
Pfam: RNA_pol_Rpb6 DUF5713
Other DBs
NCBI-ProteinID: QBX37517
Position
1368537..1368896
AA seq 119 aa
MARVTVEDCIEKVPNRFGLVLLAGHRARAIANGAALLLDRDNDKNPVVALRELAEDKVVP
DELRENIITTLQRVDERTEAEDEAETVKLLAEPQHMNMAEAELIRALQSDRDGGQEERY
NT seq 360 nt   +upstreamnt  +downstreamnt
atggcccgcgtcaccgtcgaagactgcatcgagaaggttccgaaccggttcggcctggtc
ctgctggcgggtcaccgcgcgcgcgcgatcgccaatggcgcggccctgctgcttgatcgc
gacaacgacaagaaccctgtcgtggccctgcgcgagctggccgaggacaaggtcgtgccg
gatgaactgcgcgagaacatcatcaccaccctgcagcgagttgatgagcggaccgaggca
gaagacgaggccgaaacggtcaagctgctggccgagccgcagcacatgaacatggcggag
gcggaactgatccgcgcgctgcaaagcgaccgcgacggcggtcaggaggagcgctactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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