KEGG   Brevundimonas sp. GW460-12-10-14-LB2: A4249_06290
Entry
A4249_06290       CDS       T04395                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
brg  Brevundimonas sp. GW460-12-10-14-LB2
Pathway
brg03030  DNA replication
brg03430  Mismatch repair
brg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:brg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A4249_06290
   03430 Mismatch repair
    A4249_06290
   03440 Homologous recombination
    A4249_06290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:brg03032]
    A4249_06290
   03400 DNA repair and recombination proteins [BR:brg03400]
    A4249_06290
Enzymes [BR:brg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     A4249_06290
DNA replication proteins [BR:brg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     A4249_06290
DNA repair and recombination proteins [BR:brg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     A4249_06290
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HROB
Other DBs
NCBI-ProteinID: ANC55165
UniProt: A0A160I2F9
Position
complement(1279758..1283210)
AA seq 1150 aa
MNSQGFVHLRVRSAYSLLEGAIKAAKVGKLAADSGMPAVGVADRANLFGALEFSQTAKDA
GVQPIVACALPVFGIGGQINARWAKVPTVVLLAQDTAGWLNLCALSSSAYLDAGEMAEPG
VAWEQVVARSEGLILLSGGPDGPVDPLFAQGKKAEGAAALAAMRAAFGDRFYVELQRHGL
EDEKRAEPGLVEWAYANDVPLVATNDVYYAKAGQAKSHDALLCIADGAFTGQEDRRRITG
EHWFKPAAVMREQFADLPEACDNTIDIARRCAFLVNTHAPILPRFDTGAGRSEADELAHQ
AREGLKVRLTEVTPAVPEEEYWTRLEWEVGIIQQMGFPGYFLIVSDFIKWAKTHGIPVGP
GRGSGAGSLVAWSLTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQERREEVIDYVQD
RYGKDRVAQIITFGTLQARAVLRDVGRVLQMPLGQVDRLCKMVPNNPAAPVTLAQAIDIE
PRLKEARDAEPAVKTLLETALELEGLYRNASTHAAGIVIGDRPLTELVPLYQDPRSTIPA
SQFNMKWVEPAGLVKFDFLGLKTLTVLDRARGYLERRGAAKDWNSLPLDDARTYELMASG
QTVGVFQLESQGMRDTLRKMRCGSIEEITALISLYRPGPMEMIDTYIDRKFGRAEVDYLH
PSLKEVLTETYGVIIYQEQVMKIAQVLAGYSLGEADLLRRAMGKKKKEEMDFQRLRFVKG
AAEKAVPEAQSGSIFDLVAKFAGYGFNKSHAAAYALISFQTGWLKANQPVEFFAASMSLD
LSNTDKLAVFYQDAKRFDVPVLAPDINRSSADFDVAWDDDKGAVLYALGAIRNVGLEAMK
HVIEVRETGGRFADIFDFLERVDPRSVNKRALEGLAKAGAFDSIHTNRRQLLEQADVLMA
YCQSVAAERASSQVSLFGGDQAHAARPRLKSVEPWVGPERLDHELSAVGFYLSGHPLDEM
TSALKRKRVTFVAEAIPLAESGHEAFQMAGVVRRKQERASARTGEKFAFVTFSDPTGEFE
CLFPPEQLRKCREVLEPGASVMVRVRAKSSEGEVRFFGDDASQMDNLLDDANIGLRIHVS
ARSADAEALKARLERARSGAIGKGGEVSLMIAGLDQGREVEVKIPGRYRLDGALRGALKS
APGVVMLEDA
NT seq 3453 nt   +upstreamnt  +downstreamnt
gtgaacagtcagggttttgtccatctgcgggtccgctcggcctattcgctgctggaaggc
gcgatcaaggcggccaaggtcggcaagctggcggccgactccggaatgccggcggtcggg
gtggcggaccgggccaacctgttcggcgcgctggagttcagccagacggcgaaggatgcg
ggcgttcaaccgatcgtggcctgcgccctgccggtcttcgggatcggcggccagatcaat
gcccgctgggccaaggtgccgaccgtggttctgctggcccaggatacagccgggtggctg
aacctgtgcgccctgtcgtcatccgcctatctggacgccggagaaatggccgagccgggc
gtggcctgggaacaggtcgtcgcccgctccgaagggttgatcctgctgtccggtggcccg
gacggcccggtcgatccgctgttcgcccaaggcaagaaggccgaaggcgccgctgctctg
gcggcgatgagggcggcgttcggcgaccgcttctacgtcgagctgcaacgccacgggctg
gaggatgaaaagcgcgccgagccggggctggtcgaatgggcctatgccaacgacgtgccg
ctggtcgccaccaacgacgtctattacgctaaggcggggcaggcgaaatcgcacgacgcc
ctgctgtgcatcgccgatggcgccttcaccggccaggaggatcgccgccgcatcaccggc
gaacactggttcaagcccgccgccgtcatgcgcgagcagttcgccgacttgcccgaggct
tgcgacaacaccatcgacatcgcgcgccgctgcgccttcctggtcaatactcacgcgccc
atcctgccgcgtttcgacaccggggccgggcgctccgaggccgatgaactggcccaccag
gcgcgcgaggggctgaaagtccgcctgaccgaggtcacgccggccgttcccgaagaggaa
tactggacccgcctggaatgggaggtcgggatcatccagcagatgggcttccccggctac
ttcctcatcgtgtcggacttcatcaaatgggccaagacccacggcattccggtggggccg
gggcggggctccggcgccgggtcgctggtcgcttggtccctgaccattaccgatctggat
cccttgcggttcggcctgctgttcgagcgattcctgaaccccgaacgggtctccatgccc
gacttcgacatcgacttctgccaggagcggcgggaagaggtgatcgactatgtgcaggac
cgctacggcaaggaccgggtggcccagatcatcaccttcggcaccttgcaggcgcgcgcc
gtgctgcgcgacgtgggccgtgtgctgcagatgccgctgggtcaggtcgaccggctctgc
aagatggtgccgaacaacccggccgcgcccgtcacgctggcccaggccatcgacatcgag
ccgcgcctgaaggaggcgcgtgacgccgagccggcggtgaagaccctgctggaaaccgcg
ctggagttggaggggctttaccgcaacgcctcgacccacgccgccggcatcgtcatcggc
gaccggccgctgacggaactggtgccgctgtatcaggatccgcgctccaccattccggcg
tcccagttcaacatgaaatgggtcgagccggcgggtctggtgaaattcgacttcctgggc
ctgaagacgctgacggtgctggatcgggcgcgcggctatctcgaacggcgcggcgcagcc
aaggactggaacagcctgccgctggatgacgcgcgcacctatgagctgatggcctctggc
cagacggtcggggtgttccagctggaatcccagggcatgcgcgacaccctgcgcaagatg
cgctgcggctccatcgaagagatcaccgccctgatttcgctttatcggccggggccgatg
gagatgatcgacacctatatcgaccgtaagttcgggcgcgccgaggtcgattacctgcac
cccagcctgaaagaggtgctgaccgagacctacggcgtcatcatctaccaggaacaggtg
atgaagatcgcccaggtcctggcgggctacagcctgggcgaggccgacctgctgcgccgg
gccatgggcaagaagaagaaggaggagatggatttccagcgcctccgcttcgtcaagggc
gccgccgagaaggccgtgccggaggcgcagtccggctccatcttcgacctggtggccaag
ttcgcgggctatggtttcaacaagtcccacgccgccgcctatgccctgatctcgttccag
acggggtggctgaaggccaatcagccggtcgagttcttcgcggcgtccatgagcctggac
ttgtcgaacaccgacaagctggcggtcttctatcaggacgccaaacggttcgacgtgccg
gtcctggcgcccgacatcaatcgctcgtctgccgacttcgacgtggcctgggacgacgac
aagggggcggtgctctacgccctgggcgcgatccgaaacgtgggtctcgaggcgatgaaa
cacgtcatcgaggtgcgcgagacgggcgggcggttcgccgacatcttcgatttccttgag
cgcgtcgatccgcgcagcgtgaacaagcgcgcacttgaaggtctggccaaggccggcgcc
ttcgacagcatccacaccaaccggcgtcagttgctggaacaggccgacgttctgatggcc
tattgccagagcgtggcggccgaacgcgcctcgtcgcaggtgtcgctgttcggcggcgat
caggcccatgccgcgcgcccgcggctgaagagcgtcgagccctgggtcggtccggagcgg
ctggatcacgaactgtcggcggtcggcttctatctgtcgggccacccgctagacgagatg
acctcagccctgaagcgcaagcgcgtcaccttcgtcgccgaagcgattccgctggctgag
tccggccacgaggcattccagatggccggcgtcgtgcgccgcaaacaggagcgggccagc
gcgcggacgggcgagaagttcgccttcgtgaccttctcggatccgaccggcgagttcgaa
tgtctgttcccgcccgaacaactgcgcaaatgccgcgaggtgctggagcccggcgcctcg
gtcatggtgcgcgtgcgcgccaagtcgtcggagggggaggtgcgtttcttcggagacgac
gcctcgcaaatggacaatctgctggacgacgccaacatcggccttcggatccatgtctcg
gctcgcagcgctgacgccgaggcgctgaaggcgcggctggaacgcgcgcgatcaggcgcg
atcggcaagggcggggaggtgtcgctgatgatcgcaggcctcgatcaagggcgcgaggtg
gaggtcaagattcctggtcgttatcgcctggacggggccctgcgcggcgcgctgaagtca
gcgccgggcgtcgttatgctggaggacgcctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

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