KEGG   Mycetohabitans rhizoxinica: RBRH_02343
Entry
RBRH_02343        CDS       T01355                                 
Name
(GenBank) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6)
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
brh  Mycetohabitans rhizoxinica
Pathway
brh03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:brh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    RBRH_02343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:brh03021]
    RBRH_02343
   03400 DNA repair and recombination proteins [BR:brh03400]
    RBRH_02343
Enzymes [BR:brh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     RBRH_02343
Transcription machinery [BR:brh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     RBRH_02343
DNA repair and recombination proteins [BR:brh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      RBRH_02343
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L RNA_pol_L_2 RAD51D_N
Other DBs
NCBI-ProteinID: CBW74582
UniProt: E5APQ0
Position
972201..973178
AA seq 325 aa
MQTSLLKPKIIAVDSLGDNHAKVVMEPFERGYGHTLGNALRRVLLSSMIGYAPTEVTIAG
VVHEYSTLDGVQEDVVNLLLNLKGVVFKLHNRDEVTVTLRKEGEGVVIAGDIEVPHDCEV
INPEHVIAHLSKGGKLDVQIKVEKGRGYVPGNVRRYGDESAKVIGRIVLDASFSPVRRVS
YAVESARVEQRTDLDKLVMNIETNGVISPEEAIRQSARILVDQLSVFAALEGTETTAEAP
SRAPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLDK
NT seq 978 nt   +upstreamnt  +downstreamnt
atgcaaaccagtttgttgaagcccaagatcatcgcagtggattcgcttggcgacaaccac
gcgaaagtggtcatggagccgtttgaacgcggttatggtcacaccttgggcaatgcgctc
cggcgtgttttgctatcgtcgatgatcggctatgcgccgaccgaagtgacgatcgccggc
gtcgtgcacgagtattcgacgctcgacggtgtgcaagaggacgtggtcaacctgctgttg
aacctcaagggcgtggtgttcaagctgcacaaccgcgatgaagtgaccgtcacgctgcgc
aaggaaggcgagggtgtggtgatcgccggtgacatcgaagtgccgcacgattgcgaggtc
atcaatccagagcacgttatcgcccatctctccaaaggcggcaagctcgacgtgcagatc
aaggtcgagaagggtcgtggctatgtgccgggcaacgtgcgccgctatggcgacgaaagc
gcaaaggtcatcggccgcattgtgctcgacgcgtcgttctcgccggttcgccgagtcagc
tacgcggttgagagtgcacgggttgagcagcgtaccgacctggacaagcttgtaatgaac
atcgagaccaatggtgtgatttcgccggaggaagcgattcgtcaatcggctcgtatcctg
gtcgaccagttgtccgtgttcgcggcactggaaggcaccgaaacgacggctgaagcgccg
tcgcgtgcaccgcagatcgatccgatcctgctgcgtccggtcgacgatctcgagctgacg
gtgcgctccgcgaactgtctgaaggccgagaacatctactatatcggtgacctgatccag
cgtaccgagaacgagttgttgaagacgccgaacctgggccgcaagtcgttgaacgagatc
aaggaagtgctcgcttcgcgtggcttgacgctcggcatgaagctggaaaattggccgccg
gctggcctcgacaagtaa

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