KEGG T05958: FDF13

Brevibacterium sp. CS2: FDF13_07955

Entry

FDF13_07955       CDS       T05958

Name

(GenBank) DNA topoisomerase IV subunit A

K02469

DNA gyrase subunit A [EC:5.6.2.2]

Organism

bri Brevibacterium sp. CS2

Brite

KEGG Orthology (KO) [BR:bri00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bri03032]
    FDF13_07955
   03400 DNA repair and recombination proteins [BR:bri03400]
    FDF13_07955
Enzymes [BR:bri01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     FDF13_07955
DNA replication proteins [BR:bri03032]
Prokaryotic type
  DNA Topoisomerases
   FDF13_07955
DNA repair and recombination proteins [BR:bri03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      FDF13_07955

SSDB

Motif

Pfam:

DNA_topoisoIV DNA_gyraseA_C FliT

Other DBs

NCBI-ProteinID:

QCP05229

UniProt:

A0A4P8H8A0

Position

complement(1798523..1801210)

AA seq 895 aa
MAEPVAGQIVDIDVSEEMETSFLEYAYSVIYARALPDARDGLKPVQRRIIHQMGEMGLRP
ERGHVKSSRIVGDVMGKLHPHGDTAIYDALVRLSQDFIMRVPLVDGHGNFGSLDDGPAAP
RYTEAKLTPAAMAMIAGLDEDVVDFVPNYDNTLTQPEILPAAFPNLLINGASGIAVGMAT
NMAPHNPGEVIAAARHLIENPQAGLSELMRFVPGPDLPSGGRIIGLAGVREAYETGRGTF
RTRATVKFENLTARRKGIVVTELPYLVGPEKVIEKVKDAVQAKKLTGIASIDDFSDRKHG
LRLVIGIKNGFNPDAVLSELYRLTPMEDSFGINNVCLVDGQPRTLGLKELLQVYVDHRLS
VVLRRTRFQLRKAQDRLHLVEGLLIAILDIDEVIQLIRSSDDAPTARGRLMDVFDLSELQ
ATYILDLQLRRLTKFSRLELEAERDELRARIAHLESILASDAKLRALVSAELGEAADAID
SARRTALVEGTQEVTGARRRAGTPELTIADEPCWVLLSTSGRIARTNSLAPLPTTGRRVS
HDALRSQIATTTRGTVGAITTAGRLLTVDVVALPALPPQATRPGLAGGVRIGEFVTLDAG
ERVLALVDIGTDFFLGTAGGVIKRVAGAEAPANKDSWTVVNLKPKDSVVGVGQLPDPEAA
RLVLIASNGQLLTYGADLVRAQGWNAGGVAGMKVAADARVIAVDLVDPEEDNTVVTVADG
VNFNGEPALSIKLTALAEFPTKGRATGGVRAHRFLKGETGLALAHTGPSPQAAAAGGGAR
ALPEEFGRRDGTGTPLETKIDALGALPHARGAEPEADEAAAAEAAEAAGSAPGGAAGSAP
GGEDSLDLPAHAPRRRDPDLEARREEIARARTDEGDAAVIISRDEDDDAEPGSLF

NT seq 2688 nt +upstreamnt +downstreamnt
atggcagagccggtcgcaggccagatcgtcgacatcgacgtctccgaggagatggagacc
tccttcctcgaatacgcctactcggtgatctacgcccgggccctgccggacgcccgcgac
ggcctcaagcccgtgcagcgccggatcatccaccagatgggcgagatggggctgcgcccc
gagcgcgggcacgtcaagtcctcgcgcatcgtcggcgacgtcatgggcaagctccacccg
cacggcgacaccgcgatctacgacgcgctcgtccgcctgagccaggacttcatcatgcgc
gtcccgctcgtcgacgggcacgggaacttcggcagcctcgacgacgggccggccgccccc
cgctacaccgaggcgaagctcacgcccgccgcgatggcgatgatcgccgggctcgacgag
gacgtcgtcgacttcgtcccgaactacgacaacacgctcacccagccggagatcctgccg
gcggcattccccaacctcctcatcaacggcgcctccgggatcgccgtcggcatggcgacg
aacatggccccgcacaaccccggagaggtcatcgccgccgcccgccacctcatcgagaac
ccgcaggccggtctgtccgagctcatgcgcttcgtgcccggcccggatctgccctccggc
ggccggatcatcgggctggccggggtgcgtgaggcctacgagaccgggcgcggcaccttc
cgcacccgggcgacggtgaagttcgagaatctcaccgcccgccgcaagggcatcgtcgtc
accgagctgccgtacctcgtcggtccggagaaggtcatcgagaaggtcaaggacgcggtg
caggcgaagaagctcaccggcatcgcctcgatcgacgacttctccgaccgcaagcacggc
ctgcgcctggtcatcggcattaagaacgggttcaaccccgacgcggtcctctccgagctc
taccggctcaccccgatggaggactccttcgggatcaacaacgtgtgcctcgtcgacggc
cagccgcgcacgctcgggctcaaggagctgctccaggtctacgtcgaccaccggctctcc
gtcgtgctccgccgcacccgcttccagctccgcaaggcccaggaccggctccacctcgtc
gagggtctgctcatcgcgatcctcgacatcgacgaggtcatccagctcatccgctcctcc
gacgacgcgccgaccgcccgcggccggctcatggacgtgttcgacctgtccgagctccag
gcgacctacatcctcgacctccagctgcgccgcctgacgaagttctcccggctcgagctc
gaggccgagcgcgacgagctgcgcgcccggatcgcgcacctcgagagcatcctcgcctcc
gatgcgaagctccgcgccctcgtctccgccgagctcggggaggccgccgatgcgatcgac
tccgcccgccgcaccgcgctcgtcgagggcacccaggaggtcaccggggcacgccgcagg
gccggcacccccgagctcaccatcgccgacgaaccctgctgggtgctcctgtcgacctcc
ggccggatcgcccgcacgaacagcctcgccccgctgccgacgaccggccggcgcgtgtcc
cacgacgccctgcggtcccagatcgcgacgaccacgcgcggcaccgtcggcgcgatcacc
accgccgggcgcctcctcaccgtcgacgtcgtcgcgctccccgcgctccccccgcaggcc
acccggcccggcctggccggcggggtgcggatcggggagttcgtcaccctcgacgccggc
gagcgggtgctcgccctcgtcgacatcggcacggacttcttcctcggtaccgccggcggc
gtcatcaagcgcgtcgccggggccgaggcgccggcgaacaaggactcctggaccgtcgtc
aacctcaagccgaaggactccgtggtgggcgtcgggcagctccccgaccccgaggccgcc
cgcctcgtcctcatcgcctcgaacggccagctcctcacctacggcgcggacctcgtacgc
gcgcaggggtggaacgccgggggcgtggcggggatgaaggtcgccgccgacgcccgcgtc
atcgccgtcgacctcgtcgacccggaggaggacaacaccgtcgtcaccgtcgccgacggg
gtgaacttcaacggggagcccgcgctgtcgatcaagctcaccgcgctcgcggagttcccc
acgaagggccgggcgaccggcggcgtgcgcgcccaccgcttcctcaagggcgagacgggc
ctcgcgctcgcccacaccggtccgtcaccgcaggccgcggccgccggcggcggggcgcgc
gcgctgcccgaggagttcggccgccgcgacggcaccggcaccccgctggagacgaagatc
gacgcgctcggcgccctcccccatgcccgcggggccgagcccgaggcggacgaggcggcc
gccgccgaggccgccgaggcggccgggtccgcgcccggtggggccgcggggagcgcaccg
ggcggggaggactccctcgacctgcccgcgcacgccccgcgccgccgggatcccgacctc
gaggcgcgccgcgaggagatcgcgcgggcgcgcacggacgagggggacgccgcggtgatc
atcagccgcgacgaggacgacgacgcggagcccggctccctgttctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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